Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL5A1P20908 AC137056.2-201ENST00000624055 1958 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
COL5A1P20908 SNORD1C-201ENST00000363315 78 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 RNU1-77P-201ENST00000390868 162 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 RPS26P38-201ENST00000414476 348 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 RPS17P17-201ENST00000419392 409 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 RPL7L1P9-201ENST00000431298 745 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 RN7SKP66-201ENST00000516681 231 ntBASIC5.47□□□□□ -1.53
COL5A1P20908 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.47□□□□□ -1.53
COL5A1P20908 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL5A1P20908 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A1P20908 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A1P20908 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC5.47□□□□□ -1.53
COL5A1P20908 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A1P20908 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.47□□□□□ -1.53
COL5A1P20908 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL5A1P20908 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A1P20908 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A1P20908 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
COL5A1P20908 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL5A1P20908 RNA5SP335-201ENST00000363817 110 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 AL390774.1-201ENST00000411924 246 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 MTND4LP17-201ENST00000414607 293 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.46□□□□□ -1.53
COL5A1P20908 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A1P20908 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.46□□□□□ -1.53
COL5A1P20908 AC091390.1-201ENST00000433904 331 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 AL731534.1-201ENST00000434711 269 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 PSMD10P3-201ENST00000437000 448 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.46□□□□□ -1.53
COL5A1P20908 RN7SL97P-201ENST00000486780 299 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.46□□□□□ -1.53
COL5A1P20908 AL512310.9-201ENST00000553311 948 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 MRPS21P7-201ENST00000566937 238 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A1P20908 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A1P20908 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
COL5A1P20908 AC079414.3-201ENST00000612986 1090 ntBASIC5.46□□□□□ -1.53
COL5A1P20908 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.46□□□□□ -1.53
COL5A1P20908 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.46□□□□□ -1.53
COL5A1P20908 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL5A1P20908 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 MAPK10-371ENST00000641952 5209 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A1P20908 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.46□□□□□ -1.54
COL5A1P20908 AC005725.1-201ENST00000577346 2607 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL5A1P20908 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 AC107980.1-201ENST00000558671 3355 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
COL5A1P20908 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 RNU1-59P-201ENST00000364829 162 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 AC016397.1-201ENST00000412463 242 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.46□□□□□ -1.54
COL5A1P20908 AL035090.1-201ENST00000454835 332 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 RPL7P6-201ENST00000480903 738 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 AC090142.2-201ENST00000483263 416 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.46□□□□□ -1.54
COL5A1P20908 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.46□□□□□ -1.54
COL5A1P20908 HNRNPCP1-201ENST00000556181 766 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 OR1F2P-201ENST00000570470 933 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A1P20908 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.46□□□□□ -1.54
COL5A1P20908 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.46□□□□□ -1.54
COL5A1P20908 U1.25-201ENST00000614085 162 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 U1.34-201ENST00000618578 162 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 U1.31-201ENST00000620022 160 ntBASIC5.46□□□□□ -1.54
COL5A1P20908 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.46□□□□□ -1.54
COL5A1P20908 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL5A1P20908 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL5A1P20908 UG0898H09-202ENST00000623646 7040 ntBASIC5.45□□□□□ -1.54
COL5A1P20908 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms