Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 ZNF542P-204ENST00000482727 1305 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AC007012.2-201ENST00000623206 1676 ntBASIC7.69□□□□□ -1.18
LIG1P18858 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.69□□□□□ -1.18
LIG1P18858 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
LIG1P18858 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
LIG1P18858 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
LIG1P18858 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.68□□□□□ -1.18
LIG1P18858 PARP4P1-201ENST00000435945 2337 ntBASIC7.68□□□□□ -1.18
LIG1P18858 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 AL731556.1-201ENST00000394628 3711 ntBASIC7.68□□□□□ -1.18
LIG1P18858 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 MIR99A-201ENST00000384906 81 ntBASIC7.68□□□□□ -1.18
LIG1P18858 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LIG1P18858 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC7.68□□□□□ -1.18
LIG1P18858 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 AL008987.1-201ENST00000415528 237 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 MTCO1P21-201ENST00000416634 589 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AL356320.2-201ENST00000417263 507 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 AC245452.2-201ENST00000435222 392 ntBASIC7.68□□□□□ -1.18
LIG1P18858 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 UBE2D3P4-201ENST00000441973 436 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC7.68□□□□□ -1.18
LIG1P18858 NMNAT1P3-201ENST00000457517 888 ntBASIC7.68□□□□□ -1.18
LIG1P18858 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.68□□□□□ -1.18
LIG1P18858 AC005017.1-201ENST00000482002 490 ntBASIC7.68□□□□□ -1.18
LIG1P18858 RPL21P47-201ENST00000483696 477 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC008410.1-201ENST00000483777 339 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC011037.1-201ENST00000483964 558 ntBASIC7.68□□□□□ -1.18
LIG1P18858 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.68□□□□□ -1.18
LIG1P18858 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.68□□□□□ -1.18
LIG1P18858 XKRY-201ENST00000510392 1100 ntBASIC7.68□□□□□ -1.18
LIG1P18858 MTCO2P32-201ENST00000514865 403 ntBASIC7.68□□□□□ -1.18
LIG1P18858 RN7SKP11-201ENST00000517018 287 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 IGHV3-57-201ENST00000520143 280 ntBASIC7.68□□□□□ -1.18
LIG1P18858 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
LIG1P18858 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.68□□□□□ -1.18
LIG1P18858 AC104229.1-201ENST00000561364 255 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AGGF1P8-201ENST00000562979 1000 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC026458.1-201ENST00000564330 438 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC010287.1-201ENST00000566916 357 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.68□□□□□ -1.18
LIG1P18858 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 MIR4301-201ENST00000577203 66 ntBASIC7.68□□□□□ -1.18
LIG1P18858 DPRXP4-201ENST00000578053 568 ntBASIC7.68□□□□□ -1.18
LIG1P18858 MIR4433B-201ENST00000581329 102 ntBASIC7.68□□□□□ -1.18
LIG1P18858 MTATP6P3-201ENST00000581686 676 ntBASIC7.68□□□□□ -1.18
LIG1P18858 MIR4801-201ENST00000582704 82 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.68□□□□□ -1.18
LIG1P18858 AC011497.2-201ENST00000600255 639 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC007255.2-201ENST00000604053 631 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC064872.1-201ENST00000604823 1072 ntBASIC7.68□□□□□ -1.18
LIG1P18858 AC024060.1-201ENST00000607052 494 ntBASIC7.68□□□□□ -1.18
LIG1P18858 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
LIG1P18858 GMFB-210ENST00000628554 639 ntTSL 4 BASIC7.68□□□□□ -1.18
LIG1P18858 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LIG1P18858 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
LIG1P18858 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.67□□□□□ -1.18
LIG1P18858 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.67□□□□□ -1.18
LIG1P18858 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LIG1P18858 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LIG1P18858 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.67□□□□□ -1.18
LIG1P18858 ST13P16-201ENST00000401760 781 ntBASIC7.67□□□□□ -1.18
LIG1P18858 RPS3AP37-201ENST00000419176 745 ntBASIC7.67□□□□□ -1.18
LIG1P18858 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms