Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 SNORA17.1-201ENST00000362945 126 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 RNA5SP87-201ENST00000384155 118 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.36□□□□□ -1.23
COL5A2P05997 AC006466.1-201ENST00000438721 289 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC7.36□□□□□ -1.23
COL5A2P05997 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC7.36□□□□□ -1.23
COL5A2P05997 NOP10-202ENST00000557912 436 ntTSL 2 BASIC7.36□□□□□ -1.23
COL5A2P05997 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 AC114876.1-201ENST00000490962 1366 ntBASIC7.35□□□□□ -1.23
COL5A2P05997 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.35□□□□□ -1.23
COL5A2P05997 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 AL133388.1-201ENST00000404509 287 ntBASIC7.35□□□□□ -1.23
COL5A2P05997 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.35□□□□□ -1.23
COL5A2P05997 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.35□□□□□ -1.23
COL5A2P05997 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.35□□□□□ -1.23
COL5A2P05997 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.35□□□□□ -1.23
COL5A2P05997 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.35□□□□□ -1.23
COL5A2P05997 AC087385.3-201ENST00000620477 187 ntBASIC7.35□□□□□ -1.23
COL5A2P05997 AC105105.5-201ENST00000622635 1294 ntBASIC7.35□□□□□ -1.23
COL5A2P05997 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 CASC19-281ENST00000642118 1554 ntBASIC7.35□□□□□ -1.23
COL5A2P05997 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL5A2P05997 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.35□□□□□ -1.23
COL5A2P05997 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
COL5A2P05997 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 OLMALINC-203ENST00000641087 3779 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 OR4K12P-201ENST00000406538 961 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.34□□□□□ -1.23
COL5A2P05997 AC104837.2-201ENST00000427236 424 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.34□□□□□ -1.23
COL5A2P05997 AC009220.1-201ENST00000451614 275 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 GYG1P1-201ENST00000460864 698 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 FTH1P2-201ENST00000466086 412 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.34□□□□□ -1.23
COL5A2P05997 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.34□□□□□ -1.23
COL5A2P05997 AGGF1P7-201ENST00000562369 913 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 AC067852.5-201ENST00000589299 310 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 MIR378J-201ENST00000611988 109 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
COL5A2P05997 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 AP002991.2-201ENST00000623807 2801 ntBASIC7.34□□□□□ -1.23
COL5A2P05997 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC7.34□□□□□ -1.23
COL5A2P05997 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
COL5A2P05997 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
COL5A2P05997 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.34□□□□□ -1.24
COL5A2P05997 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
COL5A2P05997 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.33□□□□□ -1.24
COL5A2P05997 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.33□□□□□ -1.24
COL5A2P05997 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.33□□□□□ -1.24
COL5A2P05997 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL5A2P05997 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC7.33□□□□□ -1.24
COL5A2P05997 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
COL5A2P05997 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL5A2P05997 AC092821.2-201ENST00000545710 2042 ntBASIC7.33□□□□□ -1.24
COL5A2P05997 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms