Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.8□□□□□ -1.48
LDLRP01130 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.8□□□□□ -1.48
LDLRP01130 AC036111.2-201ENST00000533247 901 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.8□□□□□ -1.48
LDLRP01130 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 FAM72A-208ENST00000607379 1139 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AL080312.2-201ENST00000613001 630 ntBASIC5.8□□□□□ -1.48
LDLRP01130 AC022467.1-201ENST00000614738 749 ntBASIC5.8□□□□□ -1.48
LDLRP01130 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 AP000432.2-201ENST00000624164 2048 ntBASIC5.8□□□□□ -1.48
LDLRP01130 CASC19-260ENST00000641828 2001 ntBASIC5.8□□□□□ -1.48
LDLRP01130 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.8□□□□□ -1.48
LDLRP01130 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
LDLRP01130 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
LDLRP01130 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 RNF19BPY-201ENST00000458209 1550 ntBASIC5.8□□□□□ -1.48
LDLRP01130 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LDLRP01130 AC138907.8-201ENST00000623981 2256 ntBASIC5.79□□□□□ -1.48
LDLRP01130 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.79□□□□□ -1.48
LDLRP01130 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 CDY11P-201ENST00000447168 1651 ntBASIC5.79□□□□□ -1.48
LDLRP01130 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
LDLRP01130 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 AC123769.1-201ENST00000530992 3192 ntBASIC5.79□□□□□ -1.48
LDLRP01130 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LDLRP01130 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LDLRP01130 SUGT1P2-201ENST00000379452 992 ntBASIC5.79□□□□□ -1.48
LDLRP01130 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 GTF3AP1-201ENST00000416942 1004 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.79□□□□□ -1.48
LDLRP01130 EMC3-AS1-205ENST00000438698 534 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC016908.1-201ENST00000442571 1219 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 AL161636.2-201ENST00000445179 927 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.79□□□□□ -1.48
LDLRP01130 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 RANP2-201ENST00000456833 229 ntBASIC5.79□□□□□ -1.48
LDLRP01130 RN7SL629P-201ENST00000489622 285 ntBASIC5.79□□□□□ -1.48
LDLRP01130 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 RPL7L1P4-201ENST00000513004 707 ntBASIC5.79□□□□□ -1.48
LDLRP01130 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
LDLRP01130 RN7SKP5-201ENST00000517045 272 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC087272.1-201ENST00000523624 533 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.79□□□□□ -1.48
LDLRP01130 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.79□□□□□ -1.48
LDLRP01130 AL049874.4-201ENST00000557593 255 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 MRPS21P8-201ENST00000569196 235 ntBASIC5.79□□□□□ -1.48
LDLRP01130 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.79□□□□□ -1.48
LDLRP01130 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 AC126175.1-201ENST00000617041 758 ntBASIC5.79□□□□□ -1.48
LDLRP01130 FAM27E2-201ENST00000619668 403 ntBASIC5.79□□□□□ -1.48
LDLRP01130 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LDLRP01130 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.79□□□□□ -1.48
LDLRP01130 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.79□□□□□ -1.48
LDLRP01130 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LDLRP01130 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
LDLRP01130 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LDLRP01130 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.79□□□□□ -1.48
LDLRP01130 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 AL353743.3-201ENST00000442109 1468 ntBASIC5.78□□□□□ -1.48
LDLRP01130 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms