Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.51□□□□□ -1.53
HCN1O60741 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
HCN1O60741 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HCN1O60741 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HCN1O60741 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HCN1O60741 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 GNL2P1-201ENST00000451274 2190 ntBASIC5.5□□□□□ -1.53
HCN1O60741 RBPJP7-201ENST00000442803 1447 ntBASIC5.5□□□□□ -1.53
HCN1O60741 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 RBPJP5-201ENST00000449433 1447 ntBASIC5.5□□□□□ -1.53
HCN1O60741 THAP12P9-201ENST00000503971 2360 ntBASIC5.5□□□□□ -1.53
HCN1O60741 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HCN1O60741 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 RNA5SP477-201ENST00000362639 119 ntBASIC5.5□□□□□ -1.53
HCN1O60741 RNU105B-201ENST00000364478 208 ntBASIC5.5□□□□□ -1.53
HCN1O60741 RN7SKP269-201ENST00000365545 319 ntBASIC5.5□□□□□ -1.53
HCN1O60741 MYL6P5-201ENST00000412707 459 ntBASIC5.5□□□□□ -1.53
HCN1O60741 AL096829.1-201ENST00000413677 457 ntBASIC5.5□□□□□ -1.53
HCN1O60741 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.5□□□□□ -1.53
HCN1O60741 AL158827.1-201ENST00000416300 391 ntBASIC5.5□□□□□ -1.53
HCN1O60741 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.5□□□□□ -1.53
HCN1O60741 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.5□□□□□ -1.53
HCN1O60741 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HCN1O60741 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.5□□□□□ -1.53
HCN1O60741 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.5□□□□□ -1.53
HCN1O60741 AC026782.2-201ENST00000510845 636 ntBASIC5.5□□□□□ -1.53
HCN1O60741 snoU109.5-201ENST00000516231 132 ntBASIC5.5□□□□□ -1.53
HCN1O60741 OR56A7P-201ENST00000524865 941 ntBASIC5.5□□□□□ -1.53
HCN1O60741 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HCN1O60741 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.5□□□□□ -1.53
HCN1O60741 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.5□□□□□ -1.53
HCN1O60741 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.5□□□□□ -1.53
HCN1O60741 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.5□□□□□ -1.53
HCN1O60741 AL136131.3-201ENST00000607600 188 ntBASIC5.5□□□□□ -1.53
HCN1O60741 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 AC109446.4-201ENST00000623235 2755 ntBASIC5.5□□□□□ -1.53
HCN1O60741 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.5□□□□□ -1.53
HCN1O60741 AC138907.8-201ENST00000623981 2256 ntBASIC5.5□□□□□ -1.53
HCN1O60741 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HCN1O60741 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HCN1O60741 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 RNFT1P3-201ENST00000340898 1052 ntBASIC5.49□□□□□ -1.53
HCN1O60741 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HCN1O60741 PEX12P1-201ENST00000400284 1048 ntBASIC5.49□□□□□ -1.53
HCN1O60741 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.49□□□□□ -1.53
HCN1O60741 RPS15AP30-201ENST00000420976 390 ntBASIC5.49□□□□□ -1.53
HCN1O60741 RPS3P2-201ENST00000421346 701 ntBASIC5.49□□□□□ -1.53
HCN1O60741 IPPKP1-201ENST00000422501 768 ntBASIC5.49□□□□□ -1.53
HCN1O60741 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 BX119904.3-201ENST00000428194 957 ntBASIC5.49□□□□□ -1.53
HCN1O60741 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.49□□□□□ -1.53
HCN1O60741 VN1R110P-201ENST00000438988 971 ntBASIC5.49□□□□□ -1.53
HCN1O60741 ZNF619P1-201ENST00000446539 752 ntBASIC5.49□□□□□ -1.53
HCN1O60741 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.49□□□□□ -1.53
HCN1O60741 AC083795.1-201ENST00000491760 320 ntBASIC5.49□□□□□ -1.53
HCN1O60741 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.49□□□□□ -1.53
HCN1O60741 SNORA70.11-201ENST00000515987 138 ntBASIC5.49□□□□□ -1.53
HCN1O60741 SNORA70.13-201ENST00000516116 138 ntBASIC5.49□□□□□ -1.53
HCN1O60741 WBP1LP3-201ENST00000523033 208 ntBASIC5.49□□□□□ -1.53
HCN1O60741 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.49□□□□□ -1.53
HCN1O60741 OR8Q1P-201ENST00000526467 655 ntBASIC5.49□□□□□ -1.53
HCN1O60741 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.49□□□□□ -1.53
HCN1O60741 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.49□□□□□ -1.53
HCN1O60741 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.49□□□□□ -1.53
HCN1O60741 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms