Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.21□□□□□ -1.42
O00370 AC005726.4-201ENST00000582858 458 ntBASIC6.21□□□□□ -1.42
O00370 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.21□□□□□ -1.42
O00370 RPL12P48-201ENST00000605620 304 ntBASIC6.21□□□□□ -1.42
O00370 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.21□□□□□ -1.42
O00370 AC129915.3-201ENST00000634128 948 ntBASIC6.21□□□□□ -1.42
O00370 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
O00370 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.21□□□□□ -1.42
O00370 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
O00370 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.21□□□□□ -1.42
O00370 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
O00370 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 AL591135.1-201ENST00000401578 5914 ntBASIC6.21□□□□□ -1.42
O00370 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
O00370 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
O00370 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
O00370 PDZK1P1-202ENST00000425209 1350 ntBASIC6.2□□□□□ -1.42
O00370 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.2□□□□□ -1.42
O00370 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.2□□□□□ -1.42
O00370 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
O00370 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
O00370 VTI1BP4-201ENST00000427516 527 ntBASIC6.2□□□□□ -1.42
O00370 CDY8P-201ENST00000428380 1279 ntBASIC6.2□□□□□ -1.42
O00370 AC096775.1-201ENST00000437724 448 ntBASIC6.2□□□□□ -1.42
O00370 AC023141.8-201ENST00000442554 208 ntBASIC6.2□□□□□ -1.42
O00370 CDY20P-201ENST00000447528 1279 ntBASIC6.2□□□□□ -1.42
O00370 NDUFA5P5-201ENST00000468361 342 ntBASIC6.2□□□□□ -1.42
O00370 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.2□□□□□ -1.42
O00370 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.2□□□□□ -1.42
O00370 AC006499.4-201ENST00000510947 694 ntBASIC6.2□□□□□ -1.42
O00370 GAPDHP71-201ENST00000511530 1003 ntBASIC6.2□□□□□ -1.42
O00370 IGLV3-30-201ENST00000524362 298 ntBASIC6.2□□□□□ -1.42
O00370 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.2□□□□□ -1.42
O00370 AL121594.2-201ENST00000541658 472 ntBASIC6.2□□□□□ -1.42
O00370 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.2□□□□□ -1.42
O00370 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.2□□□□□ -1.42
O00370 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.2□□□□□ -1.42
O00370 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.2□□□□□ -1.42
O00370 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.2□□□□□ -1.42
O00370 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.2□□□□□ -1.42
O00370 AC027279.4-201ENST00000624371 2072 ntBASIC6.2□□□□□ -1.42
O00370 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.2□□□□□ -1.42
O00370 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.2□□□□□ -1.42
O00370 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
O00370 FBXL21-201ENST00000297158 1305 ntBASIC6.2□□□□□ -1.42
O00370 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 TET1P1-201ENST00000426627 2301 ntBASIC6.2□□□□□ -1.42
O00370 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
O00370 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
O00370 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.19□□□□□ -1.42
O00370 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
O00370 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
O00370 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 U3.10-201ENST00000364459 214 ntBASIC6.19□□□□□ -1.42
O00370 RN7SKP78-201ENST00000364711 318 ntBASIC6.19□□□□□ -1.42
O00370 LYPLA1P3-201ENST00000402650 695 ntBASIC6.19□□□□□ -1.42
O00370 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.19□□□□□ -1.42
O00370 MRPL53P1-201ENST00000414323 319 ntBASIC6.19□□□□□ -1.42
O00370 AL035660.1-201ENST00000422041 222 ntBASIC6.19□□□□□ -1.42
O00370 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.19□□□□□ -1.42
O00370 AC002069.1-201ENST00000429649 1159 ntBASIC6.19□□□□□ -1.42
O00370 DEFA9P-201ENST00000433042 285 ntBASIC6.19□□□□□ -1.42
O00370 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
O00370 AC015983.1-201ENST00000441577 373 ntBASIC6.19□□□□□ -1.42
O00370 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.19□□□□□ -1.42
O00370 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
O00370 AC006539.1-201ENST00000481419 501 ntBASIC6.19□□□□□ -1.42
O00370 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.19□□□□□ -1.42
O00370 SUMO2P4-201ENST00000504193 276 ntBASIC6.19□□□□□ -1.42
O00370 AC078899.1-201ENST00000521432 1185 ntBASIC6.19□□□□□ -1.42
O00370 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.19□□□□□ -1.42
O00370 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.19□□□□□ -1.42
O00370 AC126615.2-201ENST00000553003 515 ntBASIC6.19□□□□□ -1.42
O00370 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.19□□□□□ -1.42
O00370 HMGN2P47-201ENST00000559378 272 ntBASIC6.19□□□□□ -1.42
O00370 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
O00370 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.19□□□□□ -1.42
O00370 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.19□□□□□ -1.42
O00370 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.19□□□□□ -1.42
O00370 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.19□□□□□ -1.42
O00370 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.19□□□□□ -1.42
O00370 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.19□□□□□ -1.42
O00370 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
O00370 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms