Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AL121594.2-201ENST00000541658 472 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC074029.2-201ENST00000551045 634 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AL356752.1-201ENST00000615844 593 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC096708.4-201ENST00000620563 552 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 MIR6813-201ENST00000621638 56 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC111152.1-202ENST00000635848 339 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF402P-201ENST00000404435 3100 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AC012254.3-201ENST00000591183 2117 ntBASIC5.95□□□□□ -1.46
TCRBV7S3A2A0A539 AL049634.1-201ENST00000453770 1720 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC114774.1-201ENST00000507410 1770 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 SNORA51.9-201ENST00000384295 124 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RN7SKP279-201ENST00000411383 298 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AL158053.1-201ENST00000441503 453 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RPS23P9-201ENST00000448848 438 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 MTND2P30-201ENST00000456663 382 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC098818.1-201ENST00000478593 252 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 CAB39P1-201ENST00000502277 460 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC113367.2-201ENST00000505749 160 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC108103.1-201ENST00000511286 446 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC027338.1-201ENST00000514840 825 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RNU6-1334P-201ENST00000516032 105 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RNU6-491P-201ENST00000516099 110 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 IGLV3-30-201ENST00000524362 298 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC126365.2-201ENST00000580630 379 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC011500.1-201ENST00000601963 469 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC005479.3-201ENST00000602790 431 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC009237.12-201ENST00000604755 742 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 BNIP3P19-201ENST00000605397 577 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 MIR6809-201ENST00000612189 116 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AC004801.6-201ENST00000616571 978 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 FAM27E2-201ENST00000619668 403 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 LINC00216-201ENST00000623548 1126 ntBASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.94□□□□□ -1.46
TCRBV7S3A2A0A539 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC107977.1-201ENST00000355745 939 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 RNU6-1331P-201ENST00000363658 106 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AC087752.1-201ENST00000391360 558 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL034417.1-201ENST00000399343 800 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL354868.1-201ENST00000417077 482 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL139158.1-201ENST00000424719 340 ntBASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.93□□□□□ -1.46
TCRBV7S3A2A0A539 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms