Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
DKK3Q9UBP4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 AC097063.1-201ENST00000426714 1797 ntBASIC6.34□□□□□ -1.4
DKK3Q9UBP4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.34□□□□□ -1.4
DKK3Q9UBP4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 RNA5SP346-201ENST00000363541 121 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 CCNB2P1-201ENST00000399411 1150 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 RNA5SP115-201ENST00000411160 107 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 RPS7P14-201ENST00000426405 583 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC010240.2-201ENST00000445363 1205 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AL133351.3-201ENST00000454998 193 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 GTF2IP9-201ENST00000502460 301 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC098862.1-201ENST00000504991 413 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 OR7E10P-201ENST00000526420 991 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 BNIP3P38-201ENST00000601117 544 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC124916.2-201ENST00000604416 224 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC073111.2-201ENST00000605657 1075 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AL445493.3-201ENST00000619568 477 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC022400.9-201ENST00000623633 273 ntBASIC6.33□□□□□ -1.4
DKK3Q9UBP4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
DKK3Q9UBP4 TNPO1P2-201ENST00000426249 2665 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC022905.1-201ENST00000503430 3048 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 WDR95P-201ENST00000425638 1542 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 RNU6-152P-201ENST00000384037 107 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 RN7SKP144-201ENST00000411108 279 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
DKK3Q9UBP4 AL392003.1-201ENST00000434394 243 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.32□□□□□ -1.4
DKK3Q9UBP4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms