Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC092121.1-201ENST00000569452 202 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MIR4311-201ENST00000580794 100 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC090953.1-201ENST00000604305 1092 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AL499605.1-201ENST00000604628 403 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AC090607.5-201ENST00000615692 224 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MIR6133-201ENST00000617057 108 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 RN7SL544P-201ENST00000617232 284 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 RN7SL763P-201ENST00000620922 284 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 AP001153.1-201ENST00000641024 338 ntBASIC6.07□□□□□ -1.44
SIX2Q9NPC8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SIX2Q9NPC8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC092451.3-201ENST00000625067 1343 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC007938.2-201ENST00000604666 2634 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC245060.4-201ENST00000413293 1121 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 RPSAP35-201ENST00000413753 818 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL022331.1-201ENST00000429025 477 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AZGP1P2-201ENST00000454506 345 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 RPL5P12-201ENST00000477071 851 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 MTND2P7-201ENST00000521337 640 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 NANOGNBP2-201ENST00000544753 553 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL139041.1-201ENST00000605480 610 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AC129778.1-202ENST00000623812 261 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL591379.1-207ENST00000635982 261 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.06□□□□□ -1.44
SIX2Q9NPC8 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SIX2Q9NPC8 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC107977.1-201ENST00000355745 939 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 RN7SKP240-201ENST00000410583 375 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 NDUFB4P8-201ENST00000435351 367 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC006335.2-201ENST00000437993 330 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC023271.1-201ENST00000445936 1090 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AP006222.1-205ENST00000450734 457 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC011476.1-201ENST00000466725 307 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 RN7SL197P-201ENST00000466981 299 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 UBFD1P1-201ENST00000473259 814 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC022215.1-201ENST00000481770 362 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 ATP5LP5-201ENST00000483050 299 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 TRIM51DP-201ENST00000529746 596 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AP005901.4-201ENST00000577336 569 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 NEPNP-201ENST00000404786 1371 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 AL161901.1-201ENST00000624954 3425 ntBASIC6.05□□□□□ -1.44
SIX2Q9NPC8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SIX2Q9NPC8 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC6.04□□□□□ -1.44
SIX2Q9NPC8 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms