Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 DHFRP1-201ENST00000579682 559 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC233702.7-202ENST00000582941 211 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 MIR8084-201ENST00000614105 89 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC073862.4-201ENST00000622982 854 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AP000770.2-201ENST00000623694 100 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 AC008993.2-201ENST00000631744 806 ntBASIC6.99□□□□□ -1.29
VTA1Q9NP79 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.99□□□□□ -1.29
VTA1Q9NP79 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
VTA1Q9NP79 OFD1P17-201ENST00000437639 3018 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL445238.1-204ENST00000400311 463 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC106883.1-201ENST00000418805 562 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 CHEK2P5-201ENST00000423877 246 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 MTCO2P1-201ENST00000424648 477 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 GAPDHP23-201ENST00000444823 993 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL627224.1-201ENST00000448334 444 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 OFD1P3Y-201ENST00000453312 783 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC011476.1-201ENST00000466725 307 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 MTCO1P31-201ENST00000506355 492 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AP003355.1-201ENST00000518956 587 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC093014.1-201ENST00000548926 724 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL121594.4-201ENST00000556211 1196 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 MIR5095-201ENST00000578844 88 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 RN7SL339P-201ENST00000580597 296 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC068313.1-201ENST00000604028 1008 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC020765.1-201ENST00000604296 328 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AL592494.3-201ENST00000609485 464 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AP000894.4-201ENST00000610185 483 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 MIR6793-201ENST00000612376 63 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC015922.4-201ENST00000612568 690 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC096708.4-201ENST00000620563 552 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC095038.2-201ENST00000621464 1070 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC127024.6-201ENST00000621598 424 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC093875.1-201ENST00000623688 504 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 AC007382.1-201ENST00000624376 2618 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 GUCY1B2-204ENST00000531898 1979 ntBASIC6.98□□□□□ -1.29
VTA1Q9NP79 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.98□□□□□ -1.29
VTA1Q9NP79 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
VTA1Q9NP79 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VTA1Q9NP79 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VTA1Q9NP79 AP000547.3-204ENST00000588548 2523 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VTA1Q9NP79 MAPK10-344ENST00000641718 3746 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VTA1Q9NP79 SNORA43.1-201ENST00000364863 140 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
VTA1Q9NP79 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.97□□□□□ -1.29
VTA1Q9NP79 MIR122-201ENST00000385044 85 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 MIR640-201ENST00000385086 96 ntBASIC6.97□□□□□ -1.29
VTA1Q9NP79 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms