Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 CCNJP2-201ENST00000457810 1163 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 TPT1P7-201ENST00000458300 517 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RNU7-140P-201ENST00000459546 60 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RPSAP39-201ENST00000467439 883 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RN7SL392P-201ENST00000473024 299 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RPL23AP8-201ENST00000479812 475 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RN7SL702P-201ENST00000488394 292 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC087257.2-201ENST00000538759 928 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 ZNF519P3-201ENST00000557158 1032 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 RN7SL199P-201ENST00000578752 281 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RN7SL656P-201ENST00000579044 281 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 MIR3689F-201ENST00000579617 66 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 RN7SL404P-201ENST00000582421 281 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 U73023.1-201ENST00000603134 700 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AP001554.1-201ENST00000604533 376 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL109618.2-201ENST00000605527 211 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC007684.1-201ENST00000609671 477 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC010333.3-201ENST00000615100 402 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 FRG1HP-204ENST00000617940 757 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL049541.2-201ENST00000626377 555 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 MIR4278-201ENST00000636094 69 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC011471.4-201ENST00000638271 216 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 CASC19-264ENST00000641912 1184 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SSU72Q9NP77 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 AC129502.1-201ENST00000623261 1654 ntBASIC6.93□□□□□ -1.3
SSU72Q9NP77 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC6.93□□□□□ -1.3
SSU72Q9NP77 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC020658.2-201ENST00000559030 4020 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC011504.1-201ENST00000623331 4103 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 RN7SKP47-201ENST00000365347 328 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 CST13P-201ENST00000376992 428 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 CES5AP1-201ENST00000400418 859 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL079341.1-201ENST00000404701 1207 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 RN7SKP188-201ENST00000410789 317 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 IPPKP1-201ENST00000422501 768 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 HMGN2P24-201ENST00000433516 273 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 USP9YP35-201ENST00000435696 412 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 CYP2C56P-201ENST00000440076 291 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL049820.1-201ENST00000442936 423 ntTSL 2 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL353898.1-201ENST00000444055 238 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC013429.1-201ENST00000456604 422 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 RPL34P34-201ENST00000465389 354 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 RN7SL516P-201ENST00000496127 297 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC096751.1-202ENST00000502691 1067 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 MTND2P33-201ENST00000506452 1031 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SSU72Q9NP77 RNA5SP116-201ENST00000516132 98 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AP001317.1-201ENST00000531194 960 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AP006587.5-201ENST00000532033 739 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 NDUFA3P4-201ENST00000560814 250 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC091304.4-201ENST00000565703 620 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC090826.1-203ENST00000569235 490 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC6.92□□□□□ -1.3
SSU72Q9NP77 AC006539.2-201ENST00000601729 572 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 BMS1P7-201ENST00000602440 1052 ntBASIC6.92□□□□□ -1.3
SSU72Q9NP77 AL512430.4-201ENST00000603085 613 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms