Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 USP24P1-201ENST00000433802 779 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 PFN1P6-201ENST00000476786 399 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC126615.2-201ENST00000553003 515 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 AL589674.2-201ENST00000604304 337 ntBASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
KIAA1549Q9HCM3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC083899.1-201ENST00000454465 3819 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 SNORA16A-201ENST00000384342 137 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AL357752.1-201ENST00000412817 349 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 OR2AT2P-201ENST00000413438 905 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC007161.1-204ENST00000423039 460 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 SIAH1P1-201ENST00000479411 923 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 EIF3LP3-201ENST00000495197 822 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 IGKV2-18-201ENST00000522607 343 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 MIR1273E-201ENST00000581165 102 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 PPATP2-201ENST00000605635 508 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 AL359513.1-201ENST00000614364 557 ntBASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.12□□□□□ -1.59
KIAA1549Q9HCM3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AL365220.1-201ENST00000432923 399 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 PTMAP6-201ENST00000439110 327 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 LRRC37A14P-201ENST00000452297 462 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RANP1-206ENST00000455094 651 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RN7SKP248-201ENST00000516278 305 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 SUMO2P19-201ENST00000518920 295 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OR7A1P-201ENST00000601206 970 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 MIR6719-201ENST00000622428 87 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AP004289.1-201ENST00000436307 2205 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RN7SKP279-201ENST00000411383 298 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 AL133173.1-201ENST00000423458 397 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 OR10T1P-201ENST00000424327 947 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 RSU1P1-201ENST00000453416 441 ntBASIC5.11□□□□□ -1.59
KIAA1549Q9HCM3 COPS8P2-201ENST00000473228 627 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms