Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL671309.1-201ENST00000603750 544 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC108865.2-201ENST00000606881 432 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
USP29Q9HBJ7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
USP29Q9HBJ7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC016583.1-201ENST00000624221 2431 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC023490.2-201ENST00000359859 470 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AL354692.1-201ENST00000423044 315 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC017019.1-201ENST00000426129 261 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 MTND4LP14-201ENST00000429447 288 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC242426.1-201ENST00000435270 960 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 PNKDP1-201ENST00000435914 430 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AL590004.3-202ENST00000445883 451 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 RAB28P2-201ENST00000454299 641 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 C1DP3-201ENST00000455013 423 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 OR2A3P-201ENST00000493774 953 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 RNU6-1334P-201ENST00000516032 105 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC244502.2-201ENST00000543361 851 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 MIR132-201ENST00000591554 101 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 PPATP2-201ENST00000605635 508 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 RPSAP75-201ENST00000605848 301 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 OR7M1P-201ENST00000608946 533 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AL096712.1-201ENST00000614561 159 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 AC073488.6-201ENST00000632293 754 ntBASIC6.27□□□□□ -1.41
USP29Q9HBJ7 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP29Q9HBJ7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC232271.1-201ENST00000602455 2715 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 RNA5SP375-201ENST00000362975 119 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL355143.1-201ENST00000407101 841 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 MTND4LP21-201ENST00000415303 295 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC073464.3-201ENST00000422564 712 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL365220.1-201ENST00000432923 399 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 DNAJA1P5-201ENST00000440278 943 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.26□□□□□ -1.41
USP29Q9HBJ7 RBBP4P1-201ENST00000502424 1276 ntBASIC6.26□□□□□ -1.41
USP29Q9HBJ7 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms