Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 AC099654.5-201ENST00000636479 350 ntBASIC7□□□□□ -1.29
BHLHE41Q9C0J9 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC7□□□□□ -1.29
BHLHE41Q9C0J9 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC104581.5-201ENST00000624171 7141 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC139426.3-201ENST00000605648 2059 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC010132.4-201ENST00000569883 1368 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 ZNF840P-201ENST00000504759 1996 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 Y_RNA.70-201ENST00000362886 110 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RNU5F-7P-201ENST00000363696 115 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RNU1-16P-201ENST00000365477 164 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 snosnR66.1-201ENST00000391095 99 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL034403.1-201ENST00000399414 885 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RNU6-575P-201ENST00000411326 105 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RPL4P4-201ENST00000422486 1284 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 HSPE1P16-201ENST00000426640 348 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 MTCO1P54-201ENST00000430139 712 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 NANOGNBP1-201ENST00000448444 480 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AP000542.1-201ENST00000448473 371 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RANP1-206ENST00000455094 651 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC040975.1-201ENST00000472104 316 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC079841.1-201ENST00000481228 950 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RN7SL563P-201ENST00000481233 298 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC066616.1-201ENST00000486795 413 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 CDH12P2-201ENST00000504393 298 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC098799.2-201ENST00000509466 868 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC017007.1-201ENST00000511960 415 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC096661.1-201ENST00000515870 822 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RNU6-314P-201ENST00000516574 104 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC087808.1-201ENST00000520501 361 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC136944.5-201ENST00000573021 151 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 RN7SL311P-201ENST00000579858 306 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC009955.2-201ENST00000597288 542 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL078623.1-201ENST00000602702 907 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC112230.1-201ENST00000604342 547 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 CUX2P1-201ENST00000606426 298 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AP005329.3-201ENST00000609924 686 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC007014.2-201ENST00000615581 479 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AL357080.1-201ENST00000617394 239 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC130448.2-201ENST00000624082 374 ntBASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 METAP1-212ENST00000625963 147 ntTSL 5 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
BHLHE41Q9C0J9 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms