Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM55Q9BYV6 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM55Q9BYV6 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
TRIM55Q9BYV6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
TRIM55Q9BYV6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 OLMALINC-203ENST00000641087 3779 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC025809.2-201ENST00000625085 1802 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TNPO1P2-201ENST00000426249 2665 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 RPS3AP5-201ENST00000389400 821 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 RNU4-64P-201ENST00000410795 131 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL390840.1-201ENST00000420303 988 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC134879.1-201ENST00000426062 394 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 FTH1P16-201ENST00000435241 552 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL451136.1-201ENST00000435399 325 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ARL5AP2-201ENST00000444698 533 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 SDHCP3-201ENST00000445371 506 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 PPIAP32-201ENST00000449940 472 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC110749.1-201ENST00000462007 357 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC117394.1-201ENST00000477323 567 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 MTND2P14-201ENST00000482139 351 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC114940.1-201ENST00000512162 1265 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 SCARNA11.1-201ENST00000516918 132 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC083923.1-201ENST00000523708 376 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC008083.2-201ENST00000546707 476 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC090695.1-201ENST00000561269 1222 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 RN7SL426P-201ENST00000579106 295 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC122710.3-201ENST00000606566 541 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 TUSC7.1-201ENST00000610969 165 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 AC012629.3-201ENST00000623397 328 ntBASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
TRIM55Q9BYV6 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TRIM55Q9BYV6 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 AC017079.1-201ENST00000333650 415 ntBASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
TRIM55Q9BYV6 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms