Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 AC083899.1-201ENST00000454465 3819 ntBASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK3Q9BYB0 AC007998.4-201ENST00000612496 2533 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 RNU4-4P-201ENST00000364588 130 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AC104837.2-201ENST00000427236 424 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AL672138.1-201ENST00000450604 1015 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 SNRPCP2-201ENST00000504370 475 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 DHFRP1-201ENST00000579682 559 ntBASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SHANK3Q9BYB0 AC114947.2-201ENST00000565748 2125 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 ERG-205ENST00000398910 4954 ntTSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 RNA5SP251-201ENST00000410614 137 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC116036.1-201ENST00000412199 367 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 FABP5P2-201ENST00000439042 408 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 RPS23P2-201ENST00000463671 415 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC092324.1-201ENST00000468671 324 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AL121594.2-201ENST00000541658 472 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC009163.6-201ENST00000612367 342 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 AC016717.3-201ENST00000624730 554 ntBASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SHANK3Q9BYB0 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 RNU1-146P-201ENST00000364015 165 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 RNU1-43P-201ENST00000365052 165 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 FAM96AP1-201ENST00000430879 482 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 PRPF38AP2-201ENST00000438179 851 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 RN7SL481P-201ENST00000477764 299 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 TOMM22P4-201ENST00000511318 336 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AL110118.1-201ENST00000553543 400 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AC020910.2-201ENST00000603635 610 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 OR55B1P-203ENST00000641518 2602 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 AC011493.1-201ENST00000596753 1632 ntBASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SHANK3Q9BYB0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 AL133388.1-201ENST00000404509 287 ntBASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 PPP2R2DP1-201ENST00000420526 637 ntBASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 RPS18P6-201ENST00000476880 458 ntBASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 RN7SKP99-201ENST00000517028 307 ntBASIC7.19□□□□□ -1.26
SHANK3Q9BYB0 RN7SKP98-201ENST00000517070 156 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms