Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC013731.1-201ENST00000604340 883 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 AC091905.4-201ENST00000623432 202 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 PWAR1-201ENST00000624188 2414 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC9.25□□□□□ -0.93
IFT140Q96RY7 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.25□□□□□ -0.93
IFT140Q96RY7 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
IFT140Q96RY7 AL008638.3-201ENST00000623027 5182 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
IFT140Q96RY7 CASC19-221ENST00000641309 1382 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 RN7SKP149-201ENST00000363008 344 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 AL133482.1-201ENST00000415988 498 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 AL731534.1-201ENST00000434711 269 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 HMGB1P44-201ENST00000508597 572 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 AC005000.1-201ENST00000536192 288 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 DPPA3P2-202ENST00000557188 1219 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 ATP5J2P6-201ENST00000565203 266 ntBASIC9.24□□□□□ -0.93
IFT140Q96RY7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
IFT140Q96RY7 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
IFT140Q96RY7 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
IFT140Q96RY7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.24□□□□□ -0.93
IFT140Q96RY7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
IFT140Q96RY7 AP002991.2-201ENST00000623807 2801 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 SNORA62-201ENST00000365493 153 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 RN7SKP151-201ENST00000410230 316 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 NPM1P40-201ENST00000412758 733 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 AL672138.1-201ENST00000450604 1015 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 RPL7P16-201ENST00000479738 738 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 SLC25A14P1-201ENST00000502867 901 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 AC020937.1-201ENST00000519677 1013 ntBASIC9.23□□□□□ -0.93
IFT140Q96RY7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
IFT140Q96RY7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC9.23□□□□□ -0.93
IFT140Q96RY7 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AL451136.1-201ENST00000435399 325 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 PRPF38AP2-201ENST00000438179 851 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AL049779.3-201ENST00000557141 606 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC009117.1-201ENST00000563948 554 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC093799.2-201ENST00000610062 578 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC009704.2-201ENST00000618739 483 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 MIR8089-201ENST00000620165 82 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 USP9YP3-201ENST00000434481 1766 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 AC104447.1-201ENST00000624214 2124 ntBASIC9.22□□□□□ -0.93
IFT140Q96RY7 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC9.22□□□□□ -0.93
IFT140Q96RY7 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
IFT140Q96RY7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
IFT140Q96RY7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 EIF3KP3-201ENST00000514461 639 ntBASIC9.21□□□□□ -0.93
IFT140Q96RY7 AL121594.2-201ENST00000541658 472 ntBASIC9.21□□□□□ -0.93
IFT140Q96RY7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.21□□□□□ -0.93
IFT140Q96RY7 MFSD8-239ENST00000641590 2479 ntBASIC9.21□□□□□ -0.93
IFT140Q96RY7 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
IFT140Q96RY7 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms