Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AL163193.1-201ENST00000444895 788 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC231760.1-201ENST00000498002 260 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 RNA5SP92-201ENST00000516437 110 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AP001804.1-201ENST00000526868 919 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 HIGD1AP5-201ENST00000529959 259 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC015802.2-201ENST00000589690 189 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 RNA5SP234-201ENST00000363916 119 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 RN7SL57P-201ENST00000493687 290 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ATP5LP3-201ENST00000514223 304 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC091078.2-201ENST00000557145 559 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 MIR6793-201ENST00000612376 63 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 RN7SKP59-201ENST00000410520 314 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 BX323845.3-201ENST00000428215 527 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 RPL36AP39-201ENST00000445859 318 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 snoU13.29-201ENST00000459370 104 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AL672167.3-201ENST00000465951 960 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AC118658.2-201ENST00000618697 459 ntBASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.91□□□□□ -1.46
SHROOM3Q8TF72 AL590763.1-201ENST00000398297 1545 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 AP002991.2-201ENST00000623807 2801 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 RN7SKP103-201ENST00000363848 320 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 AL035660.1-201ENST00000422041 222 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 OR5W1P-201ENST00000423705 938 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 OSTCP1-201ENST00000455507 450 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 RPS27AP2-201ENST00000457576 465 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 OR4A42P-201ENST00000531397 938 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 AC012557.1-201ENST00000607115 611 ntBASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SHROOM3Q8TF72 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.9□□□□□ -1.47
SHROOM3Q8TF72 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms