Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC7.98□□□□□ -1.13
RNF135Q8IUD6 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
RNF135Q8IUD6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC020904.2-202ENST00000614660 1401 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SNORA73B-201ENST00000363217 204 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RNU1-11P-201ENST00000383975 164 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SNORD65.1-201ENST00000390889 71 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ARSFP1-201ENST00000398758 477 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 COX6A1P3-201ENST00000404167 293 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RNU2-41P-201ENST00000410991 178 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 USP9YP6-201ENST00000413550 854 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 UBTFL3-201ENST00000418934 1024 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC245054.1-201ENST00000420944 258 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AP003385.1-201ENST00000426387 893 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NPM1P24-201ENST00000428039 894 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ATP5HP2-201ENST00000433885 485 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 BX005266.3-201ENST00000443013 1075 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 PAXBP1P1-201ENST00000449315 447 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 USP9YP34-201ENST00000453983 808 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 HSPE1P22-201ENST00000456856 327 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RN7SL688P-201ENST00000471754 275 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 UBTFL6-201ENST00000477929 1024 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 GAPDHP39-201ENST00000481866 979 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RPS7P6-201ENST00000485777 579 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ARL4AP2-201ENST00000507378 601 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC024451.1-201ENST00000508013 779 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 BTG4P1-201ENST00000510421 183 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RFPL4AP3-201ENST00000515267 345 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC083923.1-201ENST00000523708 376 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC096708.2-201ENST00000577676 512 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RN7SL66P-201ENST00000582099 264 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 STMN1P1-201ENST00000617809 440 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 TEX21P-201ENST00000447107 1476 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC007012.2-201ENST00000623206 1676 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AL079343.1-201ENST00000572358 1771 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 AC093909.5-201ENST00000621839 1799 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 SOCS5P5-201ENST00000402732 1586 ntBASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
RNF135Q8IUD6 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF135Q8IUD6 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF135Q8IUD6 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF135Q8IUD6 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
RNF135Q8IUD6 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
RNF135Q8IUD6 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 368.4 ms