Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 NR1H5P-201ENST00000452683 1377 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 RN7SKP78-201ENST00000364711 318 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC114878.1-201ENST00000441166 358 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TVP23BP2-201ENST00000455082 615 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC004129.2-201ENST00000457229 287 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC005165.2-201ENST00000466070 380 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC090058.1-201ENST00000498788 435 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 MTATP6P9-201ENST00000515039 680 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 RN7SKP238-201ENST00000516483 249 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 OR4A42P-201ENST00000531397 938 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC090826.1-203ENST00000569235 490 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 MTND2P13-201ENST00000577438 1039 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AP000919.1-201ENST00000582850 985 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AL359091.2-201ENST00000609303 556 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AL445670.1-201ENST00000618889 801 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AL683826.1-201ENST00000624104 627 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 AC104966.1-201ENST00000467010 1464 ntBASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ZNF549Q6P9A3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AL137141.1-201ENST00000624622 4836 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 MFSD8-239ENST00000641590 2479 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 MT-RNR1-201ENST00000389680 954 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RN7SKP17-201ENST00000411242 351 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CLNS1AP1-201ENST00000435954 682 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC096775.1-201ENST00000437724 448 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RAD1P2-201ENST00000446414 663 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC005077.1-201ENST00000449226 375 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC068491.1-201ENST00000449539 1241 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RPL12P39-201ENST00000455456 496 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC092865.4-201ENST00000477936 615 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RBBP4P1-201ENST00000502424 1276 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC008628.1-201ENST00000508663 265 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 ST13P12-201ENST00000508958 1094 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 RNA5SP340-201ENST00000517132 107 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC084121.1-201ENST00000533882 835 ntBASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.82□□□□□ -1.48
ZNF549Q6P9A3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms