Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MTND1P14-201ENST00000427400 950 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 VN1R54P-201ENST00000435210 1049 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 FGF7P5-201ENST00000441829 291 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC068135.1-201ENST00000446164 246 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC004815.1-201ENST00000484185 331 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 OR5H5P-201ENST00000503164 928 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 HMGB1P47-201ENST00000511281 589 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 PDCL2P2-201ENST00000533651 189 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 ZNF519P3-201ENST00000557158 1032 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC024267.2-201ENST00000582737 417 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC015802.2-201ENST00000589690 189 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AL355333.1-201ENST00000605632 279 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
RNF43Q68DV7 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AL356361.1-201ENST00000400943 1459 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 NCLP2-201ENST00000416078 1462 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC006042.3-201ENST00000454684 1469 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF43Q68DV7 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF43Q68DV7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC007406.5-201ENST00000570140 3170 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 AC027279.4-201ENST00000624371 2072 ntBASIC7.34□□□□□ -1.23
RNF43Q68DV7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.34□□□□□ -1.23
RNF43Q68DV7 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RNF43Q68DV7 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.24
RNF43Q68DV7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
RNF43Q68DV7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 RNA5SP472-201ENST00000363868 119 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 FAM204BP-201ENST00000369171 701 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 Y_RNA.390-201ENST00000383932 102 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 MIR1266-201ENST00000408125 84 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 RWDD4P2-201ENST00000426392 563 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 USP9YP31-201ENST00000431405 881 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 RNF148-202ENST00000447240 839 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 TPT1P14-201ENST00000448018 505 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 OTX2P1-201ENST00000450956 354 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 OR7E7P-201ENST00000455678 1012 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC004890.1-201ENST00000461005 181 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 RN7SL372P-201ENST00000461982 298 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 DEFB109A-201ENST00000482450 265 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 RN7SL350P-201ENST00000492591 299 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC146944.3-201ENST00000509969 371 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC026782.2-201ENST00000510845 636 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 RN7SKP11-201ENST00000517018 287 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC120036.3-201ENST00000517826 292 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 CARSP2-201ENST00000520688 277 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 SETP17-201ENST00000534163 817 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC125612.1-201ENST00000547580 377 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 ELOCP32-201ENST00000548625 324 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 EIF4A3P1-201ENST00000578499 647 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 WDR45BP1-201ENST00000583470 1029 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC106791.2-201ENST00000604680 391 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 LSM1P2-201ENST00000604911 322 ntBASIC7.33□□□□□ -1.24
RNF43Q68DV7 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms