Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC110602.1-201ENST00000437414 318 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 CST12P-201ENST00000457644 362 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 RPL34P33-201ENST00000486062 334 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 UBE2V1P12-201ENST00000503954 474 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC090568.1-201ENST00000509499 856 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 IGHV3-57-201ENST00000520143 280 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC118942.1-201ENST00000529674 1035 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AP003115.1-201ENST00000569849 463 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AP000919.1-202ENST00000581139 1264 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AL359513.1-201ENST00000614364 557 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 RMST_10.1-201ENST00000616309 154 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AC022400.9-201ENST00000623633 273 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AP000770.2-201ENST00000623694 100 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 AP001962.1-201ENST00000624114 559 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 MFSD8-213ENST00000641134 1327 ntBASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CCDC144BQ3MJ40 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC110373.1-201ENST00000505994 3505 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 SNORD56.4-201ENST00000363883 71 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 RNU6-207P-201ENST00000384137 107 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AL035422.1-201ENST00000414193 397 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AL590806.1-201ENST00000415818 853 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 OR13Z1P-201ENST00000416141 834 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 TCEA1P2-201ENST00000420496 906 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 DEFB130D-201ENST00000426866 237 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC092447.2-201ENST00000435487 669 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 OR2L9P-201ENST00000444456 913 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC069540.1-201ENST00000446320 988 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 TVP23CP1-201ENST00000450317 639 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 GM2AP2-201ENST00000491764 562 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 RPL17P2-201ENST00000491913 451 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 RPL19P11-201ENST00000495944 589 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC025459.1-201ENST00000504072 156 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC021451.1-201ENST00000523498 1129 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AP001372.4-201ENST00000524889 472 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 CYCSP25-201ENST00000525280 316 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AL133399.1-201ENST00000527476 298 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 TRIM51DP-201ENST00000529746 596 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AP004609.2-201ENST00000532177 190 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AL049840.5-201ENST00000602827 552 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 VN1R9P-201ENST00000614184 867 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 U1.41-201ENST00000617626 165 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC092451.3-201ENST00000625067 1343 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC144BQ3MJ40 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms