Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 RN7SL32P-201ENST00000580514 281 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 SYPL1P2-201ENST00000582878 727 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC005229.3-201ENST00000603438 323 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AL591222.2-201ENST00000604443 754 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AL390877.1-201ENST00000605704 214 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.38□□□□□ -1.55
SCN1BQ07699 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 LINC02495-203ENST00000636704 242 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.38□□□□□ -1.55
SCN1BQ07699 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 TCP11X1-202ENST00000622971 1372 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.38□□□□□ -1.55
SCN1BQ07699 FANCD2P2-201ENST00000437591 1400 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 AC005702.3-201ENST00000585345 1447 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SCN1BQ07699 VPS35P1-201ENST00000563400 1518 ntBASIC5.38□□□□□ -1.55
SCN1BQ07699 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SCN1BQ07699 AC002525.1-201ENST00000624392 1622 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 AL359091.1-201ENST00000449048 1734 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 AP001029.2-203ENST00000589795 4910 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SCN1BQ07699 AL161756.3-201ENST00000641216 2071 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 OR5T3-201ENST00000303059 1023 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 SNORD16-201ENST00000362803 99 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RN7SKP257-201ENST00000364525 309 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RNA5SP279-201ENST00000365513 117 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN1BQ07699 RN7SKP221-201ENST00000410420 301 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AL590806.1-201ENST00000415818 853 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 MGAT2P2-201ENST00000427194 797 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 MRPS33P4-201ENST00000434892 317 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 NPM1P23-201ENST00000440193 849 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC023271.1-201ENST00000445936 1090 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AL162739.1-201ENST00000450606 307 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.37□□□□□ -1.55
SCN1BQ07699 RARRES2P3-201ENST00000457739 473 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RPL5P13-201ENST00000462840 709 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 RN7SL413P-201ENST00000482700 297 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RN7SL267P-201ENST00000485107 261 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC093870.1-201ENST00000506837 213 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 HMGB1P47-201ENST00000511281 589 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 MINOS1P4-201ENST00000515470 318 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RNU6-362P-201ENST00000516736 90 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 OR9G2P-201ENST00000533326 880 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC023080.1-201ENST00000551663 931 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 TPRX1P1-201ENST00000557620 319 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC012414.2-201ENST00000559474 187 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 CD24P2-201ENST00000565486 219 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC020916.2-201ENST00000591242 360 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 RPL7AP69-201ENST00000595306 806 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC036176.3-201ENST00000602456 418 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC084373.1-201ENST00000603311 235 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 AC005021.1-201ENST00000608730 355 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC239803.2-201ENST00000610161 430 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 AC006924.1-201ENST00000610750 559 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.37□□□□□ -1.55
SCN1BQ07699 OR5AC4P-202ENST00000642086 985 ntBASIC5.37□□□□□ -1.55
SCN1BQ07699 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms