Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL1Q00532 ATP5LP2-201ENST00000440646 311 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 EIF5AP4-201ENST00000441206 465 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AL512605.1-202ENST00000441919 381 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AL359955.2-201ENST00000445380 353 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL1Q00532 EIF4E2P2-201ENST00000492033 736 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL1Q00532 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 RN7SKP238-201ENST00000516483 249 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 WBP1LP3-201ENST00000523033 208 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.69□□□□□ -1.5
CDKL1Q00532 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.69□□□□□ -1.5
CDKL1Q00532 AC006512.2-201ENST00000543250 486 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.69□□□□□ -1.5
CDKL1Q00532 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 AL596275.2-207ENST00000641188 675 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 AL034546.1-201ENST00000623740 3693 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 AC137056.2-201ENST00000624055 1958 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 AC117409.1-201ENST00000470499 1310 ntBASIC5.69□□□□□ -1.5
CDKL1Q00532 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDKL1Q00532 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDKL1Q00532 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDKL1Q00532 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AF287957.1-201ENST00000607368 1595 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 MFSD8-239ENST00000641590 2479 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDKL1Q00532 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CDKL1Q00532 RNA5SP431-201ENST00000410312 120 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 RNGTTP1-201ENST00000420965 728 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 VTI1BP4-201ENST00000427516 527 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 NPM1P18-201ENST00000434232 732 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 YRDCP3-201ENST00000456507 480 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC104339.1-201ENST00000465478 348 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.68□□□□□ -1.5
CDKL1Q00532 RN7SL193P-201ENST00000491708 276 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 RPSAP51-201ENST00000497462 645 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AC105384.2-201ENST00000508433 640 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC111000.6-201ENST00000514471 709 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AL356801.1-201ENST00000559320 294 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 CYCSP38-201ENST00000559840 322 ntBASIC5.68□□□□□ -1.5
CDKL1Q00532 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.68□□□□□ -1.5
CDKL1Q00532 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDKL1Q00532 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CDKL1Q00532 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL1Q00532 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.67□□□□□ -1.5
CDKL1Q00532 AC020656.2-201ENST00000613291 5309 ntBASIC5.67□□□□□ -1.5
CDKL1Q00532 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL1Q00532 AC011933.2-201ENST00000578539 2790 ntBASIC5.67□□□□□ -1.5
CDKL1Q00532 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL1Q00532 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL1Q00532 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CDKL1Q00532 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CDKL1Q00532 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDKL1Q00532 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL1Q00532 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL1Q00532 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CDKL1Q00532 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
CDKL1Q00532 RNU1-65P-201ENST00000363919 148 ntBASIC5.67□□□□□ -1.5
CDKL1Q00532 RN7SKP81-201ENST00000365603 331 ntBASIC5.67□□□□□ -1.5
CDKL1Q00532 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL1Q00532 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.67□□□□□ -1.5
CDKL1Q00532 SUMO2P8-201ENST00000434672 286 ntBASIC5.67□□□□□ -1.5
CDKL1Q00532 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.67□□□□□ -1.5
CDKL1Q00532 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.67□□□□□ -1.5
CDKL1Q00532 RPL12P39-201ENST00000455456 496 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms