Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A1P61619 AC097504.2-201ENST00000608088 454 ntBASIC5.37□□□□□ -1.55
SEC61A1P61619 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A1P61619 MIR6721-201ENST00000617181 87 ntBASIC5.37□□□□□ -1.55
SEC61A1P61619 AC090772.4-201ENST00000623599 362 ntBASIC5.37□□□□□ -1.55
SEC61A1P61619 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A1P61619 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A1P61619 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.37□□□□□ -1.55
SEC61A1P61619 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.37□□□□□ -1.55
SEC61A1P61619 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.37□□□□□ -1.55
SEC61A1P61619 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SEC61A1P61619 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SEC61A1P61619 BIN2P1-201ENST00000504996 1530 ntBASIC5.37□□□□□ -1.55
SEC61A1P61619 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SEC61A1P61619 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.37□□□□□ -1.55
SEC61A1P61619 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SEC61A1P61619 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AL121768.1-201ENST00000613917 2544 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SEC61A1P61619 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 DHFRP2-201ENST00000414224 547 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC073508.1-201ENST00000428866 656 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 MTND5P8-201ENST00000449817 1083 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC118758.1-202ENST00000454719 225 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC093763.2-201ENST00000505334 1223 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AC114322.1-201ENST00000506771 926 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC027338.1-201ENST00000514840 825 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 SNORA74.1-201ENST00000516320 180 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AC022826.1-201ENST00000519383 805 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC005000.1-201ENST00000536192 288 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC015911.5-201ENST00000587076 451 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.36□□□□□ -1.55
SEC61A1P61619 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 AP000770.2-201ENST00000623694 100 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AC008993.2-201ENST00000631744 806 ntBASIC5.36□□□□□ -1.55
SEC61A1P61619 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.36□□□□□ -1.55
SEC61A1P61619 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A1P61619 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.36□□□□□ -1.55
SEC61A1P61619 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.36□□□□□ -1.55
SEC61A1P61619 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SEC61A1P61619 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SEC61A1P61619 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SEC61A1P61619 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A1P61619 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 CUL4AP1-201ENST00000514750 1863 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 CASC19-246ENST00000641625 1606 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.35□□□□□ -1.55
SEC61A1P61619 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 AL627171.1-201ENST00000618845 1308 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SEC61A1P61619 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SEC61A1P61619 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 SNORA63.3-201ENST00000362682 132 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SEC61A1P61619 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SEC61A1P61619 CXADRP1-201ENST00000398098 1095 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 AL391419.1-201ENST00000398901 1275 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 YWHAZP6-201ENST00000399764 738 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 AL353692.2-201ENST00000407054 335 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.35□□□□□ -1.55
SEC61A1P61619 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.35□□□□□ -1.55
SEC61A1P61619 AL512504.1-201ENST00000415494 778 ntBASIC5.35□□□□□ -1.55
SEC61A1P61619 RPL21P50-201ENST00000417698 477 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms