Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC7.28□□□□□ -1.24
RTP1P59025 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.28□□□□□ -1.24
RTP1P59025 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 THAP12P8-201ENST00000447914 2115 ntBASIC7.28□□□□□ -1.24
RTP1P59025 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.28□□□□□ -1.24
RTP1P59025 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RTP1P59025 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.28□□□□□ -1.24
RTP1P59025 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
RTP1P59025 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
RTP1P59025 EIF3EP1-201ENST00000433978 1316 ntBASIC7.27□□□□□ -1.24
RTP1P59025 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
RTP1P59025 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.27□□□□□ -1.24
RTP1P59025 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 OR5H2-201ENST00000355273 945 ntBASIC7.27□□□□□ -1.25
RTP1P59025 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
RTP1P59025 RNU6-906P-201ENST00000384700 70 ntBASIC7.27□□□□□ -1.25
RTP1P59025 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 CR769776.1-201ENST00000441254 787 ntBASIC7.27□□□□□ -1.25
RTP1P59025 BMS1P10-201ENST00000443754 1120 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.27□□□□□ -1.25
RTP1P59025 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 AC090543.1-201ENST00000492168 485 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC7.27□□□□□ -1.25
RTP1P59025 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AC096754.1-201ENST00000508904 818 ntBASIC7.27□□□□□ -1.25
RTP1P59025 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 AC060775.1-201ENST00000518241 520 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC021733.2-201ENST00000518830 497 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 MRPS36P3-201ENST00000519284 130 ntBASIC7.27□□□□□ -1.25
RTP1P59025 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 AC090022.1-201ENST00000546569 311 ntBASIC7.27□□□□□ -1.25
RTP1P59025 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC7.27□□□□□ -1.25
RTP1P59025 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 AC007599.1-201ENST00000568688 1174 ntBASIC7.27□□□□□ -1.25
RTP1P59025 MRPS21P8-201ENST00000569196 235 ntBASIC7.27□□□□□ -1.25
RTP1P59025 LINC00556-201ENST00000569603 412 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AL157899.1-201ENST00000604110 936 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC139493.1-201ENST00000604368 397 ntBASIC7.27□□□□□ -1.25
RTP1P59025 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 AC004775.1-201ENST00000607389 753 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AC025016.1-201ENST00000616746 682 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.27□□□□□ -1.25
RTP1P59025 AL645927.2-201ENST00000618350 349 ntBASIC7.27□□□□□ -1.25
RTP1P59025 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 BX649567.1-201ENST00000642071 1134 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC062022.1-201ENST00000451026 1684 ntBASIC7.27□□□□□ -1.25
RTP1P59025 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.27□□□□□ -1.25
RTP1P59025 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.27□□□□□ -1.25
RTP1P59025 AC009831.5-201ENST00000624000 3189 ntBASIC7.27□□□□□ -1.25
RTP1P59025 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.27□□□□□ -1.25
RTP1P59025 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RTP1P59025 MTCO1P28-201ENST00000574177 1528 ntBASIC7.27□□□□□ -1.25
RTP1P59025 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 UG0898H09-202ENST00000623646 7040 ntBASIC7.26□□□□□ -1.25
RTP1P59025 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.26□□□□□ -1.25
RTP1P59025 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
RTP1P59025 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RTP1P59025 MIR513B-201ENST00000385136 84 ntBASIC7.26□□□□□ -1.25
RTP1P59025 AL157702.1-201ENST00000398764 426 ntBASIC7.26□□□□□ -1.25
RTP1P59025 RPL5P20-201ENST00000403848 896 ntBASIC7.26□□□□□ -1.25
RTP1P59025 RPL5P19-201ENST00000404228 893 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms