Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.07□□□□□ -1.44
LIMK1P53667 AC073575.2-201ENST00000614212 627 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AC005393.1-201ENST00000617916 584 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 AC012653.2-201ENST00000621880 420 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 MTCO1P15-201ENST00000529569 1526 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.07□□□□□ -1.44
LIMK1P53667 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.07□□□□□ -1.44
LIMK1P53667 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LIMK1P53667 CUL4AP1-201ENST00000514750 1863 ntBASIC6.07□□□□□ -1.44
LIMK1P53667 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LIMK1P53667 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LIMK1P53667 CCNT2P1-201ENST00000423082 1315 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 AC109780.1-201ENST00000451768 1344 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LIMK1P53667 AL590763.1-201ENST00000398297 1545 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 PSG10P-201ENST00000501199 1500 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LIMK1P53667 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
LIMK1P53667 AL133270.1-201ENST00000402635 279 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 RPS7P8-201ENST00000418311 581 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 RFESDP1-201ENST00000422350 461 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 CYCSP52-201ENST00000422857 310 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 BX119904.3-201ENST00000428194 957 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 BX323845.3-201ENST00000428215 527 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC073909.1-201ENST00000447112 999 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 AL133445.1-201ENST00000467051 452 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 COPS8P2-201ENST00000473228 627 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 SIAH1P1-201ENST00000479411 923 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 RPL23AP68-201ENST00000480924 445 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.06□□□□□ -1.44
LIMK1P53667 GAPDHP71-201ENST00000511530 1003 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.06□□□□□ -1.44
LIMK1P53667 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.06□□□□□ -1.44
LIMK1P53667 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.06□□□□□ -1.44
LIMK1P53667 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.06□□□□□ -1.44
LIMK1P53667 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 AC107905.1-201ENST00000616204 426 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 HSPD1P7-201ENST00000447985 1686 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
LIMK1P53667 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.06□□□□□ -1.44
LIMK1P53667 AL133243.2-201ENST00000610331 1621 ntBASIC6.06□□□□□ -1.44
LIMK1P53667 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
LIMK1P53667 AC005332.9-201ENST00000620266 2921 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC027088.4-201ENST00000611559 1947 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 AC235565.1-201ENST00000456962 1325 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LIMK1P53667 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LIMK1P53667 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 RNU1-49P-201ENST00000363468 159 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms