Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.99□□□□□ -1.45
HTTP42858 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HTTP42858 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 AC005034.3-201ENST00000604845 1747 ntBASIC5.99□□□□□ -1.45
HTTP42858 AC009948.5-201ENST00000624360 4406 ntBASIC5.99□□□□□ -1.45
HTTP42858 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HTTP42858 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
HTTP42858 AL121886.1-201ENST00000358609 435 ntBASIC5.99□□□□□ -1.45
HTTP42858 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.99□□□□□ -1.45
HTTP42858 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.99□□□□□ -1.45
HTTP42858 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 THAP12P9-201ENST00000503971 2360 ntBASIC5.98□□□□□ -1.45
HTTP42858 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 AC112498.1-201ENST00000444401 332 ntBASIC5.98□□□□□ -1.45
HTTP42858 RPL10P17-201ENST00000453852 316 ntBASIC5.98□□□□□ -1.45
HTTP42858 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.98□□□□□ -1.45
HTTP42858 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.98□□□□□ -1.45
HTTP42858 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.98□□□□□ -1.45
HTTP42858 AC005377.1-201ENST00000605126 456 ntBASIC5.98□□□□□ -1.45
HTTP42858 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 AP003119.3-201ENST00000566747 4192 ntBASIC5.98□□□□□ -1.45
HTTP42858 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 XIST-206ENST00000434839 2865 ntTSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 AC006206.1-201ENST00000544842 3387 ntBASIC5.98□□□□□ -1.45
HTTP42858 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HTTP42858 MED28P3-201ENST00000444288 531 ntBASIC5.98□□□□□ -1.45
HTTP42858 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.98□□□□□ -1.45
HTTP42858 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
HTTP42858 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC5.98□□□□□ -1.45
HTTP42858 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HTTP42858 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HTTP42858 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 AL451063.1-201ENST00000450164 1133 ntBASIC5.97□□□□□ -1.45
HTTP42858 AC011005.3-201ENST00000491624 395 ntBASIC5.97□□□□□ -1.45
HTTP42858 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.97□□□□□ -1.45
HTTP42858 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.97□□□□□ -1.45
HTTP42858 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.97□□□□□ -1.45
HTTP42858 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 GAPDHP15-201ENST00000398586 975 ntBASIC5.97□□□□□ -1.45
HTTP42858 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 RPL17P36-201ENST00000420302 549 ntBASIC5.97□□□□□ -1.45
HTTP42858 RPS7P6-201ENST00000485777 579 ntBASIC5.97□□□□□ -1.45
HTTP42858 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 AL034374.2-201ENST00000605281 548 ntBASIC5.97□□□□□ -1.45
HTTP42858 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HTTP42858 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.97□□□□□ -1.45
HTTP42858 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
HTTP42858 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.96□□□□□ -1.45
HTTP42858 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.96□□□□□ -1.45
HTTP42858 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.96□□□□□ -1.45
HTTP42858 RSU1P1-201ENST00000453416 441 ntBASIC5.96□□□□□ -1.45
HTTP42858 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.96□□□□□ -1.45
HTTP42858 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HTTP42858 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.96□□□□□ -1.45
HTTP42858 SCARNA9-201ENST00000530422 353 ntBASIC5.96□□□□□ -1.45
HTTP42858 OR5AM1P-201ENST00000532136 1032 ntBASIC5.96□□□□□ -1.45
HTTP42858 OR8B1P-202ENST00000641132 1178 ntBASIC5.96□□□□□ -1.45
HTTP42858 AC104162.1-201ENST00000430831 2382 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms