Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.61□□□□□ -1.35
CIITAP33076 AL445665.1-202ENST00000452436 324 ntBASIC6.61□□□□□ -1.35
CIITAP33076 MTND2P3-201ENST00000452458 470 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AP002371.1-201ENST00000463604 433 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC007998.1-201ENST00000474156 672 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.61□□□□□ -1.35
CIITAP33076 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.61□□□□□ -1.35
CIITAP33076 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.61□□□□□ -1.35
CIITAP33076 RNU6-1334P-201ENST00000516032 105 ntBASIC6.61□□□□□ -1.35
CIITAP33076 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.61□□□□□ -1.35
CIITAP33076 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.61□□□□□ -1.35
CIITAP33076 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.61□□□□□ -1.35
CIITAP33076 FAM27E4-201ENST00000605259 342 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC012467.1-201ENST00000607740 256 ntBASIC6.61□□□□□ -1.35
CIITAP33076 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CIITAP33076 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 AL078595.2-201ENST00000605309 1780 ntBASIC6.61□□□□□ -1.35
CIITAP33076 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.61□□□□□ -1.35
CIITAP33076 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.61□□□□□ -1.35
CIITAP33076 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CIITAP33076 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.61□□□□□ -1.35
CIITAP33076 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
CIITAP33076 AC120036.2-201ENST00000509729 1474 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC106872.5-201ENST00000508856 1416 ntBASIC6.6□□□□□ -1.35
CIITAP33076 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.6□□□□□ -1.35
CIITAP33076 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.6□□□□□ -1.35
CIITAP33076 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 AC022164.1-201ENST00000568767 2673 ntBASIC6.6□□□□□ -1.35
CIITAP33076 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.6□□□□□ -1.35
CIITAP33076 AC022417.1-201ENST00000624768 1303 ntBASIC6.6□□□□□ -1.35
CIITAP33076 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 OR5T3-201ENST00000303059 1023 ntBASIC6.6□□□□□ -1.35
CIITAP33076 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 MIR375-201ENST00000362103 64 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC093155.2-201ENST00000420734 937 ntBASIC6.6□□□□□ -1.35
CIITAP33076 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.6□□□□□ -1.35
CIITAP33076 GAPDHP48-201ENST00000436626 961 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 OSTCP1-201ENST00000455507 450 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC004129.2-201ENST00000457229 287 ntBASIC6.6□□□□□ -1.35
CIITAP33076 SNORA70.20-201ENST00000516848 126 ntBASIC6.6□□□□□ -1.35
CIITAP33076 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 AC079600.1-201ENST00000550326 297 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.6□□□□□ -1.35
CIITAP33076 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.6□□□□□ -1.35
CIITAP33076 MIR3614-201ENST00000581261 86 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.6□□□□□ -1.35
CIITAP33076 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 AP003400.2-201ENST00000624036 666 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AP001962.1-201ENST00000624114 559 ntBASIC6.6□□□□□ -1.35
CIITAP33076 AC106730.3-201ENST00000624568 641 ntBASIC6.6□□□□□ -1.35
CIITAP33076 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CIITAP33076 ZNF402P-201ENST00000404435 3100 ntBASIC6.6□□□□□ -1.35
CIITAP33076 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CIITAP33076 AC007159.1-201ENST00000566529 4706 ntBASIC6.59□□□□□ -1.35
CIITAP33076 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CIITAP33076 AC015689.2-201ENST00000528172 1738 ntBASIC6.59□□□□□ -1.35
CIITAP33076 NEPNP-201ENST00000404786 1371 ntBASIC6.59□□□□□ -1.35
CIITAP33076 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.59□□□□□ -1.35
CIITAP33076 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CIITAP33076 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.59□□□□□ -1.35
CIITAP33076 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CIITAP33076 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CIITAP33076 RN7SKP78-201ENST00000364711 318 ntBASIC6.59□□□□□ -1.35
CIITAP33076 RNA5SP284-201ENST00000384547 118 ntBASIC6.59□□□□□ -1.35
CIITAP33076 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CIITAP33076 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
CIITAP33076 AL050305.1-201ENST00000399993 1230 ntBASIC6.59□□□□□ -1.35
CIITAP33076 NPM1P38-201ENST00000403835 865 ntBASIC6.59□□□□□ -1.35
CIITAP33076 EEF1B2P8-201ENST00000414101 671 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms