Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
CPS1P31327 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
CPS1P31327 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC8.02□□□□□ -1.13
CPS1P31327 NLRP3P1-201ENST00000622303 1785 ntBASIC8.02□□□□□ -1.13
CPS1P31327 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
CPS1P31327 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.02□□□□□ -1.13
CPS1P31327 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CPS1P31327 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.02□□□□□ -1.13
CPS1P31327 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.02□□□□□ -1.13
CPS1P31327 AC234781.3-201ENST00000452540 973 ntBASIC8.02□□□□□ -1.13
CPS1P31327 ACA64.4-201ENST00000459070 127 ntBASIC8.02□□□□□ -1.13
CPS1P31327 RN7SL352P-201ENST00000466002 277 ntBASIC8.02□□□□□ -1.13
CPS1P31327 IGBP1P5-201ENST00000507524 1000 ntBASIC8.02□□□□□ -1.13
CPS1P31327 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.02□□□□□ -1.13
CPS1P31327 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.02□□□□□ -1.13
CPS1P31327 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.02□□□□□ -1.13
CPS1P31327 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.02□□□□□ -1.13
CPS1P31327 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.02□□□□□ -1.13
CPS1P31327 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.02□□□□□ -1.13
CPS1P31327 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
CPS1P31327 AC011493.1-201ENST00000596753 1632 ntBASIC8.02□□□□□ -1.13
CPS1P31327 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
CPS1P31327 AC008957.3-201ENST00000624112 2242 ntBASIC8.02□□□□□ -1.13
CPS1P31327 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.01□□□□□ -1.13
CPS1P31327 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.01□□□□□ -1.13
CPS1P31327 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
CPS1P31327 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
CPS1P31327 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 AL353626.3-201ENST00000413399 657 ntBASIC8.01□□□□□ -1.13
CPS1P31327 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.01□□□□□ -1.13
CPS1P31327 AC073072.2-201ENST00000447425 348 ntBASIC8.01□□□□□ -1.13
CPS1P31327 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC8.01□□□□□ -1.13
CPS1P31327 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.01□□□□□ -1.13
CPS1P31327 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.01□□□□□ -1.13
CPS1P31327 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.01□□□□□ -1.13
CPS1P31327 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.01□□□□□ -1.13
CPS1P31327 BLZF2P-201ENST00000553776 1130 ntBASIC8.01□□□□□ -1.13
CPS1P31327 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC8.01□□□□□ -1.13
CPS1P31327 AC068790.4-201ENST00000602474 263 ntBASIC8.01□□□□□ -1.13
CPS1P31327 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC8.01□□□□□ -1.13
CPS1P31327 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
CPS1P31327 IMMTP1-201ENST00000435590 2219 ntBASIC8.01□□□□□ -1.13
CPS1P31327 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.01□□□□□ -1.13
CPS1P31327 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
CPS1P31327 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC8□□□□□ -1.13
CPS1P31327 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
CPS1P31327 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 RNU4-2-201ENST00000365668 141 ntBASIC8□□□□□ -1.13
CPS1P31327 NIFKP3-201ENST00000417799 865 ntBASIC8□□□□□ -1.13
CPS1P31327 AC016027.5-201ENST00000427227 210 ntBASIC8□□□□□ -1.13
CPS1P31327 AL731534.1-201ENST00000434711 269 ntBASIC8□□□□□ -1.13
CPS1P31327 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8□□□□□ -1.13
CPS1P31327 TOMM20P2-201ENST00000540082 421 ntBASIC8□□□□□ -1.13
CPS1P31327 AC092490.3-201ENST00000545370 572 ntBASIC8□□□□□ -1.13
CPS1P31327 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8□□□□□ -1.13
CPS1P31327 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC8□□□□□ -1.13
CPS1P31327 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8□□□□□ -1.13
CPS1P31327 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8□□□□□ -1.13
CPS1P31327 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 AL662795.2-201ENST00000624252 3706 ntBASIC8□□□□□ -1.13
CPS1P31327 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
CPS1P31327 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
CPS1P31327 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC8□□□□□ -1.13
CPS1P31327 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8□□□□□ -1.13
CPS1P31327 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC8□□□□□ -1.13
CPS1P31327 AC010401.2-201ENST00000575137 4934 ntBASIC8□□□□□ -1.13
CPS1P31327 AC092724.1-201ENST00000624623 3397 ntBASIC7.99□□□□□ -1.13
CPS1P31327 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CPS1P31327 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CPS1P31327 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CPS1P31327 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC7.99□□□□□ -1.13
CPS1P31327 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CPS1P31327 AC068538.1-201ENST00000376856 336 ntBASIC7.99□□□□□ -1.13
CPS1P31327 RNA5SP487-201ENST00000410186 122 ntBASIC7.99□□□□□ -1.13
CPS1P31327 TMA16P2-201ENST00000413187 601 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms