Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC116353.3-201ENST00000511215 249 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 MTATP6P1-201ENST00000514057 681 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC109635.6-201ENST00000525487 1113 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 KCTD9P4-201ENST00000526766 1166 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 OR5M4P-201ENST00000529436 925 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.42□□□□□ -1.38
HOXC12P31275 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC090115.2-201ENST00000548060 883 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 CHEK2P2-201ENST00000554701 672 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC092718.4-201ENST00000566639 716 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 MIR3912-201ENST00000577566 105 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXC12P31275 COX6CP16-201ENST00000603667 216 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AP000811.1-201ENST00000603803 651 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 CR382285.1-202ENST00000604687 547 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 RNU6-84P-201ENST00000607737 102 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AP000238.1-201ENST00000608759 426 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AC007786.3-201ENST00000615154 596 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC024595.1-201ENST00000623088 387 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 FP325313.1-201ENST00000638228 703 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXC12P31275 AC007993.1-201ENST00000621298 2430 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXC12P31275 ECM1P2-201ENST00000503354 1577 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXC12P31275 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXC12P31275 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
HOXC12P31275 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC068860.1-201ENST00000623701 3736 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXC12P31275 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HOXC12P31275 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXC12P31275 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXC12P31275 AC105749.1-201ENST00000631338 2008 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXC12P31275 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
HOXC12P31275 AC093536.2-201ENST00000565257 1406 ntBASIC6.42□□□□□ -1.38
HOXC12P31275 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 ATP5BP1-201ENST00000411980 1574 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HOXC12P31275 RNU6-560P-201ENST00000364007 108 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
HOXC12P31275 Y_RNA.560-201ENST00000384689 102 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 MTCO3P41-201ENST00000414801 328 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC009413.1-201ENST00000414823 399 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 KCTD9P1-201ENST00000430462 1167 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 OR13K1P-201ENST00000444577 975 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 OR52J1P-201ENST00000450596 932 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 KF459542.1-201ENST00000450908 553 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 RPL12P26-201ENST00000452430 487 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 RN7SL152P-201ENST00000484176 298 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC009153.1-201ENST00000485799 496 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC107401.1-201ENST00000503426 685 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 OR7E163P-201ENST00000505943 894 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HOXC12P31275 RNU6-1004P-201ENST00000516584 111 ntBASIC6.41□□□□□ -1.38
HOXC12P31275 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXC12P31275 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC12P31275 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC12P31275 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC12P31275 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms