Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 AL139805.2-201ENST00000455305 2433 ntBASIC8.25□□□□□ -1.09
RXRBP28702 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 AC089998.1-201ENST00000548575 3141 ntBASIC8.25□□□□□ -1.09
RXRBP28702 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 Y_RNA.436-201ENST00000384097 102 ntBASIC8.25□□□□□ -1.09
RXRBP28702 RN7SKP213-201ENST00000410746 298 ntBASIC8.25□□□□□ -1.09
RXRBP28702 RNU6-564P-201ENST00000410983 104 ntBASIC8.25□□□□□ -1.09
RXRBP28702 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 ANKRD54P1-201ENST00000433115 471 ntBASIC8.25□□□□□ -1.09
RXRBP28702 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 PPIAP10-201ENST00000438675 458 ntBASIC8.25□□□□□ -1.09
RXRBP28702 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 ANKRD26P4-201ENST00000455755 950 ntBASIC8.25□□□□□ -1.09
RXRBP28702 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 RPS4XP23-201ENST00000487801 237 ntBASIC8.25□□□□□ -1.09
RXRBP28702 RPL15P21-201ENST00000495592 567 ntBASIC8.25□□□□□ -1.09
RXRBP28702 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.25□□□□□ -1.09
RXRBP28702 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8.25□□□□□ -1.09
RXRBP28702 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AC023825.1-201ENST00000566704 1030 ntBASIC8.25□□□□□ -1.09
RXRBP28702 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
RXRBP28702 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC8.25□□□□□ -1.09
RXRBP28702 VN1R9P-201ENST00000614184 867 ntBASIC8.25□□□□□ -1.09
RXRBP28702 AC091304.6-201ENST00000619761 202 ntBASIC8.25□□□□□ -1.09
RXRBP28702 CU639417.4-201ENST00000623928 207 ntBASIC8.25□□□□□ -1.09
RXRBP28702 AP003400.2-201ENST00000624036 666 ntBASIC8.25□□□□□ -1.09
RXRBP28702 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 AC022325.1-201ENST00000502748 2199 ntBASIC8.25□□□□□ -1.09
RXRBP28702 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
RXRBP28702 AC095050.2-201ENST00000510748 1458 ntBASIC8.25□□□□□ -1.09
RXRBP28702 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RXRBP28702 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 FLJ42393-201ENST00000623801 2270 ntBASIC8.24□□□□□ -1.09
RXRBP28702 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RXRBP28702 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
RXRBP28702 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 AC021755.1-201ENST00000559747 1447 ntBASIC8.24□□□□□ -1.09
RXRBP28702 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RXRBP28702 SELENOWP1-201ENST00000322792 252 ntBASIC8.24□□□□□ -1.09
RXRBP28702 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC8.24□□□□□ -1.09
RXRBP28702 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RXRBP28702 ADIG-201ENST00000373348 430 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
RXRBP28702 RN7SKP273-201ENST00000411392 314 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 CEACAMP9-201ENST00000442990 513 ntBASIC8.24□□□□□ -1.09
RXRBP28702 MTCO2P7-201ENST00000446518 666 ntBASIC8.24□□□□□ -1.09
RXRBP28702 NPM1P49-201ENST00000448027 714 ntBASIC8.24□□□□□ -1.09
RXRBP28702 EXOSC3P1-201ENST00000448649 500 ntBASIC8.24□□□□□ -1.09
RXRBP28702 SUMO2P10-201ENST00000452006 288 ntBASIC8.24□□□□□ -1.09
RXRBP28702 GEMIN2P1-201ENST00000454246 752 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 RPS14P8-201ENST00000478778 369 ntBASIC8.24□□□□□ -1.09
RXRBP28702 RN7SL817P-201ENST00000480777 288 ntBASIC8.24□□□□□ -1.09
RXRBP28702 RPSAP50-201ENST00000481955 852 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 MTND4LP18-201ENST00000526864 291 ntBASIC8.24□□□□□ -1.09
RXRBP28702 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RXRBP28702 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.24□□□□□ -1.09
RXRBP28702 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.24□□□□□ -1.09
RXRBP28702 AGGF1P6-201ENST00000569213 976 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AL606834.3-201ENST00000602615 496 ntBASIC8.24□□□□□ -1.09
RXRBP28702 FAM27E4-201ENST00000605259 342 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC092354.2-201ENST00000607786 514 ntBASIC8.24□□□□□ -1.09
RXRBP28702 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC8.24□□□□□ -1.09
RXRBP28702 AC009318.3-201ENST00000616916 503 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms