Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FRG2IP-201ENST00000563581 781 ntBASIC8.01□□□□□ -1.13
RFX1P22670 ROCK1P1-201ENST00000573767 549 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC8.01□□□□□ -1.13
RFX1P22670 AL589765.5-201ENST00000596133 515 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CUX2P1-201ENST00000606426 298 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
RFX1P22670 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 AC135068.11-201ENST00000636378 921 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CASC19-212ENST00000641153 1287 ntBASIC8.01□□□□□ -1.13
RFX1P22670 AL353743.4-201ENST00000422653 1547 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 AC069222.1-201ENST00000608028 3360 ntBASIC8.01□□□□□ -1.13
RFX1P22670 TRIM60P14-201ENST00000513444 1419 ntBASIC8.01□□□□□ -1.13
RFX1P22670 OR2A20P-201ENST00000479887 2913 ntBASIC8.01□□□□□ -1.13
RFX1P22670 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
RFX1P22670 EPS15P1-202ENST00000459691 2071 ntBASIC8.01□□□□□ -1.13
RFX1P22670 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.01□□□□□ -1.13
RFX1P22670 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RFX1P22670 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8□□□□□ -1.13
RFX1P22670 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 HSPD1P9-201ENST00000420325 1636 ntBASIC8□□□□□ -1.13
RFX1P22670 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8□□□□□ -1.13
RFX1P22670 AL133243.4-201ENST00000623116 3109 ntBASIC8□□□□□ -1.13
RFX1P22670 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
RFX1P22670 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 ARMCX7P-201ENST00000372828 562 ntBASIC8□□□□□ -1.13
RFX1P22670 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8□□□□□ -1.13
RFX1P22670 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 SNORA11C-201ENST00000408532 129 ntBASIC8□□□□□ -1.13
RFX1P22670 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8□□□□□ -1.13
RFX1P22670 CDK8P2-201ENST00000415020 547 ntBASIC8□□□□□ -1.13
RFX1P22670 GAPDHP49-201ENST00000421421 961 ntBASIC8□□□□□ -1.13
RFX1P22670 AC105052.2-201ENST00000434317 794 ntBASIC8□□□□□ -1.13
RFX1P22670 AL357520.1-201ENST00000441557 453 ntBASIC8□□□□□ -1.13
RFX1P22670 RPS26P30-201ENST00000443431 335 ntBASIC8□□□□□ -1.13
RFX1P22670 GTF2F2P2-201ENST00000445825 721 ntBASIC8□□□□□ -1.13
RFX1P22670 RPL5P32-201ENST00000454085 879 ntBASIC8□□□□□ -1.13
RFX1P22670 AC013429.1-201ENST00000456604 422 ntBASIC8□□□□□ -1.13
RFX1P22670 AC011825.1-201ENST00000484967 388 ntBASIC8□□□□□ -1.13
RFX1P22670 RPL5P33-201ENST00000487833 905 ntBASIC8□□□□□ -1.13
RFX1P22670 AC004069.2-201ENST00000505438 1114 ntBASIC8□□□□□ -1.13
RFX1P22670 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC8□□□□□ -1.13
RFX1P22670 AC109458.1-201ENST00000508858 316 ntBASIC8□□□□□ -1.13
RFX1P22670 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 RNU6-416P-201ENST00000516265 103 ntBASIC8□□□□□ -1.13
RFX1P22670 MTND4LP26-201ENST00000518144 282 ntBASIC8□□□□□ -1.13
RFX1P22670 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 CA1-215ENST00000522389 551 ntTSL 3 BASIC8□□□□□ -1.13
RFX1P22670 OR5G4P-201ENST00000525251 760 ntBASIC8□□□□□ -1.13
RFX1P22670 NMNAT1P5-201ENST00000559657 841 ntBASIC8□□□□□ -1.13
RFX1P22670 AGGF1P8-201ENST00000562979 1000 ntBASIC8□□□□□ -1.13
RFX1P22670 MIR548Y-201ENST00000582739 110 ntBASIC8□□□□□ -1.13
RFX1P22670 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC8□□□□□ -1.13
RFX1P22670 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8□□□□□ -1.13
RFX1P22670 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC8□□□□□ -1.13
RFX1P22670 AC093765.1-201ENST00000603758 881 ntBASIC8□□□□□ -1.13
RFX1P22670 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8□□□□□ -1.13
RFX1P22670 AC068137.3-201ENST00000639191 341 ntBASIC8□□□□□ -1.13
RFX1P22670 AC073869.6-201ENST00000640656 341 ntBASIC8□□□□□ -1.13
RFX1P22670 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8□□□□□ -1.13
RFX1P22670 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8□□□□□ -1.13
RFX1P22670 SF3A3P1-201ENST00000446317 1477 ntBASIC8□□□□□ -1.13
RFX1P22670 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC8□□□□□ -1.13
RFX1P22670 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8□□□□□ -1.13
RFX1P22670 DDX10P2-201ENST00000417796 2614 ntBASIC7.99□□□□□ -1.13
RFX1P22670 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RFX1P22670 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.99□□□□□ -1.13
RFX1P22670 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms