Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 CBX1P5-201ENST00000475330 559 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.9□□□□□ -1.14
LMNB1P20700 Y_RNA.667-201ENST00000516212 107 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 TMEM97P2-201ENST00000517841 403 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 ZNF321P-202ENST00000550843 495 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC073046.2-201ENST00000604756 527 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AC015849.2-201ENST00000605738 409 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AC005277.2-201ENST00000617898 390 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 AC092140.2-201ENST00000618027 521 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC7.9□□□□□ -1.14
LMNB1P20700 AC098679.4-201ENST00000624241 654 ntBASIC7.9□□□□□ -1.14
LMNB1P20700 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
LMNB1P20700 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LMNB1P20700 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.9□□□□□ -1.15
LMNB1P20700 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
LMNB1P20700 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LMNB1P20700 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
LMNB1P20700 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.9□□□□□ -1.15
LMNB1P20700 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
LMNB1P20700 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.15
LMNB1P20700 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
LMNB1P20700 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.9□□□□□ -1.15
LMNB1P20700 DDX43P1-201ENST00000510713 1763 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 AC096992.2-201ENST00000609553 1684 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.89□□□□□ -1.15
LMNB1P20700 RBPJP7-201ENST00000442803 1447 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RBPJP5-201ENST00000449433 1447 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
LMNB1P20700 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 SNORA58B-201ENST00000364259 136 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AL391361.1-201ENST00000405580 489 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RN7SKP286-201ENST00000410894 299 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RN7SKP293-201ENST00000411389 296 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RPL23AP18-201ENST00000416139 468 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC7.89□□□□□ -1.15
LMNB1P20700 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC7.89□□□□□ -1.15
LMNB1P20700 VN1R38P-201ENST00000450265 887 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 CFL1P4-201ENST00000451536 498 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RPS27AP2-201ENST00000457576 465 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.89□□□□□ -1.15
LMNB1P20700 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 AP003033.1-201ENST00000527244 415 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC7.89□□□□□ -1.15
LMNB1P20700 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.89□□□□□ -1.15
LMNB1P20700 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 AL353778.1-201ENST00000603149 408 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC073333.2-201ENST00000603589 769 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC005034.4-201ENST00000603612 899 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC211433.2-201ENST00000608433 387 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC7.89□□□□□ -1.15
LMNB1P20700 RNA5SP440-201ENST00000612665 119 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC245014.3-201ENST00000618589 347 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC130448.2-201ENST00000624082 374 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.89□□□□□ -1.15
LMNB1P20700 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.89□□□□□ -1.15
LMNB1P20700 OR4G1P-202ENST00000641173 1788 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 AC015689.2-201ENST00000528172 1738 ntBASIC7.89□□□□□ -1.15
LMNB1P20700 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LMNB1P20700 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LMNB1P20700 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
LMNB1P20700 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.88□□□□□ -1.15
LMNB1P20700 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.88□□□□□ -1.15
LMNB1P20700 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
LMNB1P20700 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.88□□□□□ -1.15
LMNB1P20700 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.88□□□□□ -1.15
LMNB1P20700 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.88□□□□□ -1.15
LMNB1P20700 MFSD8-213ENST00000641134 1327 ntBASIC7.88□□□□□ -1.15
LMNB1P20700 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LMNB1P20700 OR5H2-201ENST00000355273 945 ntBASIC7.88□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms