Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 AC011933.2-201ENST00000578539 2790 ntBASIC6.37□□□□□ -1.39
COL11A1P12107 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL11A1P12107 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.37□□□□□ -1.39
COL11A1P12107 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL11A1P12107 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL11A1P12107 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL11A1P12107 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 RN7SKP115-201ENST00000363177 317 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.36□□□□□ -1.39
COL11A1P12107 AC009784.1-201ENST00000426484 460 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC105399.1-202ENST00000447303 205 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.36□□□□□ -1.39
COL11A1P12107 RPS23P2-201ENST00000463671 415 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL11A1P12107 AC137627.1-201ENST00000545761 289 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 BLZF2P-201ENST00000553776 1130 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 RPL10P14-201ENST00000565265 298 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 MIR6837-201ENST00000620884 64 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 AC123769.2-201ENST00000624332 5984 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.36□□□□□ -1.39
COL11A1P12107 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.36□□□□□ -1.39
COL11A1P12107 AK3P5-201ENST00000432033 519 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 NANOGP9-201ENST00000439890 892 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.36□□□□□ -1.39
COL11A1P12107 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 RN7SL30P-201ENST00000488416 306 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 RN7SKP253-201ENST00000516424 309 ntBASIC6.36□□□□□ -1.39
COL11A1P12107 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
COL11A1P12107 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL11A1P12107 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COL11A1P12107 HSPD1P7-201ENST00000447985 1686 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.35□□□□□ -1.39
COL11A1P12107 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.35□□□□□ -1.39
COL11A1P12107 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.35□□□□□ -1.39
COL11A1P12107 SNORD56.6-201ENST00000384569 71 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 MIR551A-201ENST00000385042 96 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 AC073850.1-201ENST00000449243 255 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 AC093763.2-201ENST00000505334 1223 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.35□□□□□ -1.39
COL11A1P12107 OR5AM1P-201ENST00000532136 1032 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.35□□□□□ -1.39
COL11A1P12107 AC015720.2-201ENST00000567709 334 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.35□□□□□ -1.39
COL11A1P12107 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.35□□□□□ -1.39
COL11A1P12107 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.35□□□□□ -1.39
COL11A1P12107 LINC01739-205ENST00000641890 573 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL11A1P12107 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
COL11A1P12107 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.35□□□□□ -1.39
COL11A1P12107 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
COL11A1P12107 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL11A1P12107 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.35□□□□□ -1.39
COL11A1P12107 MAPK10-371ENST00000641952 5209 ntBASIC6.35□□□□□ -1.39
COL11A1P12107 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms