Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 OR4A46P-201ENST00000527255 933 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC6P09630 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.59□□□□□ -1.35
HOXC6P09630 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC6P09630 AC027334.1-201ENST00000603257 310 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.59□□□□□ -1.35
HOXC6P09630 SUGT1P3-202ENST00000604259 383 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.59□□□□□ -1.35
HOXC6P09630 MIR6798-201ENST00000612887 67 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 AC022960.2-201ENST00000616300 666 ntBASIC6.59□□□□□ -1.35
HOXC6P09630 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
HOXC6P09630 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HOXC6P09630 OR52B5P-204ENST00000641744 3467 ntBASIC6.59□□□□□ -1.36
HOXC6P09630 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.59□□□□□ -1.36
HOXC6P09630 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC6P09630 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HOXC6P09630 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC6P09630 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC6P09630 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 RNA5SP234-201ENST00000363916 119 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC6P09630 AC019205.1-201ENST00000421830 730 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AC006455.6-201ENST00000426192 893 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC6P09630 AL663074.2-201ENST00000440621 479 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 AC005532.2-201ENST00000467154 373 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC6P09630 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 OR10G5P-201ENST00000532733 358 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC6P09630 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 RBM22P12-201ENST00000567098 1255 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 AC079414.3-201ENST00000612986 1090 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HOXC6P09630 AC110716.2-201ENST00000563865 3945 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 AL022323.4-201ENST00000623980 13120 ntBASIC6.58□□□□□ -1.36
HOXC6P09630 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.58□□□□□ -1.36
HOXC6P09630 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC6P09630 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC6P09630 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
HOXC6P09630 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 AC023632.6-201ENST00000624338 2177 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC6P09630 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HOXC6P09630 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HOXC6P09630 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC6P09630 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC6P09630 AC023141.8-201ENST00000442554 208 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 EEF1B2P5-201ENST00000444820 548 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC6P09630 RN7SL826P-201ENST00000479724 288 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AC087672.1-201ENST00000479876 766 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 RN7SL570P-201ENST00000484405 292 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 RPL32P33-201ENST00000487023 394 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 RPS23P1-201ENST00000491662 432 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 RPL17P2-201ENST00000491913 451 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AC008953.1-201ENST00000497334 318 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 NDUFA5P12-201ENST00000503796 343 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AC074255.1-201ENST00000511259 501 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC6P09630 AC139365.2-201ENST00000517972 253 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC6P09630 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC6P09630 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC6P09630 AL137246.2-201ENST00000613439 662 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 AC005840.5-201ENST00000619166 599 ntBASIC6.57□□□□□ -1.36
HOXC6P09630 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms