Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 MT-RNR1-201ENST00000389680 954 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AP003170.5-201ENST00000397185 335 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC116036.1-201ENST00000412199 367 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 MRPL53P1-201ENST00000414323 319 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AL513325.1-201ENST00000417716 1034 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 RPS17P17-201ENST00000419392 409 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC127526.2-201ENST00000426436 775 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 DEFA9P-201ENST00000433042 285 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 DNAJC19P5-201ENST00000443295 316 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AL136038.1-201ENST00000497246 351 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC119751.4-201ENST00000507498 357 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC109481.1-201ENST00000509173 282 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC022404.1-201ENST00000555320 273 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 GARSP1-201ENST00000570895 719 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 SNORD95-201ENST00000579879 68 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 FAM72A-208ENST00000607379 1139 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC063944.3-201ENST00000609969 533 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC022960.3-201ENST00000619794 441 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AC087565.3-203ENST00000641018 837 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
HLA-DOAP06340 AL627171.1-201ENST00000618845 1308 ntBASIC6.99□□□□□ -1.29
HLA-DOAP06340 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-DOAP06340 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC006511.3-201ENST00000624929 1783 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL355377.1-201ENST00000621125 1653 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 RNU6-925P-201ENST00000384629 104 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 RN7SKP29-201ENST00000410957 272 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL663074.2-201ENST00000440621 479 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AP000281.1-201ENST00000444036 316 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 RPS3AP53-201ENST00000454716 778 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 TVP23BP2-201ENST00000455082 615 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC106806.2-201ENST00000509365 500 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 RPL7L1P4-201ENST00000513004 707 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 OR8X1P-201ENST00000534542 869 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 MIR4260-201ENST00000583107 67 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 OR1AB1P-201ENST00000585564 761 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC004890.3-201ENST00000605566 1095 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC104763.3-201ENST00000613765 618 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 RN7SL544P-201ENST00000617232 284 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 RN7SL763P-201ENST00000620922 284 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AP003400.2-201ENST00000624036 666 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-DOAP06340 AL136520.1-201ENST00000600311 1322 ntBASIC6.98□□□□□ -1.29
HLA-DOAP06340 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-DOAP06340 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HLA-DOAP06340 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-DOAP06340 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms