Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
HOXA2O43364 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC109780.2-201ENST00000413467 845 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 ZNF90P2-204ENST00000419323 1075 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 B3GALNT1P1-201ENST00000420569 975 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC009303.1-201ENST00000426307 352 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AL353093.1-201ENST00000441292 436 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AL137074.1-201ENST00000442640 465 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 RPS26P30-201ENST00000443431 335 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 YAP1P2-201ENST00000455104 610 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 SULT1D1P-201ENST00000458020 882 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.32□□□□□ -1.08
HOXA2O43364 HMGB1P29-201ENST00000505659 499 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 SNX5P1-201ENST00000505757 1041 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 CDC42P3-201ENST00000518493 633 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 IGLVIV-59-201ENST00000520218 250 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.32□□□□□ -1.08
HOXA2O43364 ARL2BPP5-201ENST00000523141 481 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AL359212.1-201ENST00000556608 614 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC044860.3-201ENST00000559957 368 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AC010200.2-201ENST00000605098 235 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 AC006065.6-201ENST00000625201 545 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 SAMMSON-227ENST00000642114 1199 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 SND1-IT1-201ENST00000623342 2481 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC8.32□□□□□ -1.08
HOXA2O43364 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
HOXA2O43364 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AC108099.1-201ENST00000564402 3258 ntBASIC8.32□□□□□ -1.08
HOXA2O43364 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.32□□□□□ -1.08
HOXA2O43364 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
HOXA2O43364 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 SPATA2P1-201ENST00000431223 2055 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXA2O43364 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 PARP1P1-201ENST00000413631 3026 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 AP000766.1-201ENST00000561746 4140 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HOXA2O43364 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
HOXA2O43364 SNORD56.2-201ENST00000363242 71 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AL139327.1-201ENST00000382988 348 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC113608.1-201ENST00000398740 305 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 EI24P3-201ENST00000399046 1062 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC8.31□□□□□ -1.08
HOXA2O43364 AL161742.1-201ENST00000418154 584 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 RPS27AP14-201ENST00000422868 454 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC8.31□□□□□ -1.08
HOXA2O43364 BLOC1S2P1-201ENST00000428431 301 ntBASIC8.31□□□□□ -1.08
HOXA2O43364 NQO1-204ENST00000439109 924 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.31□□□□□ -1.08
HOXA2O43364 AC239800.1-201ENST00000442049 719 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms