Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC079097.1-201ENST00000512187 1399 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 PSMC1P4-201ENST00000515236 1327 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 IL6STP1-201ENST00000346911 1020 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RNU1-47P-201ENST00000362966 163 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 GCNT6-201ENST00000379591 934 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 SNORA51.7-201ENST00000384171 134 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RAN-201ENST00000392367 780 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 GGA1-205ENST00000405147 575 ntTSL 4 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 PTCD2P2-201ENST00000415579 1095 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 ZBTB8OSP2-201ENST00000423890 504 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC079584.1-201ENST00000426716 464 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AF241728.1-201ENST00000432359 1180 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 TMEM183AP1-205ENST00000432739 290 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC000362.1-201ENST00000433725 425 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02210-201ENST00000444561 288 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RPE-213ENST00000445268 668 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 MTND6P5-201ENST00000448266 512 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 PRPF38AP1-201ENST00000451976 933 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009502.2-201ENST00000452903 766 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC016489.1-201ENST00000461109 375 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC107015.1-201ENST00000466902 747 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RN7SL214P-201ENST00000487317 265 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AP003084.1-201ENST00000524828 742 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 OR56A7P-201ENST00000524865 941 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC009729.1-201ENST00000548873 1133 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC069240.2-201ENST00000550242 609 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 HMGB3P26-201ENST00000560051 582 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC005070.1-201ENST00000603744 365 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL136139.1-201ENST00000605568 222 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL356608.1-201ENST00000610034 820 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 uc_338.26-201ENST00000612659 160 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL445670.1-201ENST00000618889 801 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 EIF5P2-201ENST00000618904 1035 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL359745.1-201ENST00000626943 760 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL356585.10-201ENST00000641883 123 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC130304.1-201ENST00000622942 2385 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC007996.1-201ENST00000620414 2821 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AL445487.1-201ENST00000415694 1580 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AC011266.1-201ENST00000624119 3569 ntBASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHKB-CPT1BH3BT56 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 AL162456.1-201ENST00000634535 2006 ntBASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHKB-CPT1BH3BT56 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms