Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC044797.1-201ENST00000445744 679 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 IGBP1P3-201ENST00000447449 1000 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MORF4L1P4-201ENST00000450245 976 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AL136981.1-203ENST00000451452 3844 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 HMGB1P26-201ENST00000452520 628 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MRPL35P4-201ENST00000453682 566 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC019084.1-201ENST00000457337 432 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RPL21P18-201ENST00000469899 480 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC044810.1-201ENST00000480271 711 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL502P-201ENST00000481857 290 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC092045.1-201ENST00000495716 1231 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AL135933.1-201ENST00000498657 802 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC025459.1-201ENST00000504072 156 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MTATP6P22-201ENST00000507369 598 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AP001803.1-201ENST00000525668 147 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 PDCD5P1-201ENST00000543528 309 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MYL6-211ENST00000548580 528 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 EIF1P5-201ENST00000585002 234 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AC016542.3-201ENST00000623520 619 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 LRRC77P-213ENST00000637727 880 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 CASC19-212ENST00000641153 1287 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 WNK1-220ENST00000574564 1401 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 ELF2P3-201ENST00000445099 1506 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MELK-207ENST00000536860 2342 ntTSL 2 BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 MRRFP1-201ENST00000435941 1675 ntBASIC9.2□□□□□ -0.94
PDZRN3Q9UPQ7 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 TMC3-AS1-206ENST00000612811 2726 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RNU4-92P-201ENST00000363783 136 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RNU6-83P-201ENST00000384568 112 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC121334.1-201ENST00000396414 802 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SKP146-201ENST00000410242 334 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC007899.1-201ENST00000412776 775 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC009237.5-201ENST00000414271 501 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 UBE2V1P9-201ENST00000414760 368 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AL593856.1-201ENST00000419949 805 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AP003385.1-201ENST00000426387 893 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 DEFA11P-201ENST00000446470 261 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 PTENP1-201ENST00000447117 1215 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 TPT1P7-201ENST00000458300 517 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SL205P-201ENST00000490174 284 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 UBE2Q2P10-201ENST00000514854 900 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RN7SKP70-201ENST00000516655 271 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 ST13P6-201ENST00000522430 1102 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 NDUFA8P1-201ENST00000605525 367 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 OR2BH1P-201ENST00000608850 864 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC023158.2-201ENST00000614876 543 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC002553.4-201ENST00000616896 331 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 RPSAP68-201ENST00000625020 438 ntBASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC9.19□□□□□ -0.94
PDZRN3Q9UPQ7 AC026108.1-201ENST00000635444 547 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms