Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC108078.1-201ENST00000508073 725 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 MTND4LP22-201ENST00000508209 276 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 CARSP2-201ENST00000520688 277 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 KCTD9P4-201ENST00000526766 1166 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AL135978.1-201ENST00000553618 1266 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC044913.1-201ENST00000557200 430 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC105275.2-201ENST00000567907 711 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 RN7SL66P-201ENST00000582099 264 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 MIR665-201ENST00000635949 72 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 OR7E161P-202ENST00000641994 1033 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 LRRC37A6P-202ENST00000448648 5444 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 MTCO1P9-201ENST00000505577 1534 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 AC022507.1-201ENST00000548349 1505 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 CUL4AP1-201ENST00000514750 1863 ntBASIC10.17□□□□□ -0.78
PHF8Q9UPP1 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 GDNF-AS1-203ENST00000514532 2913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC10.17□□□□□ -0.78
PHF8Q9UPP1 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC135352.1-201ENST00000506173 1418 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 OR2A3P-202ENST00000641249 1776 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 RNU6-254P-201ENST00000363377 107 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 Y_RNA.311-201ENST00000365068 96 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 Y_RNA.431-201ENST00000384086 102 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 SNORA70.8-201ENST00000384231 136 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 SNORD65-201ENST00000391079 73 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 PIGPP2-201ENST00000411569 458 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC009310.1-201ENST00000414414 451 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 VN1R20P-201ENST00000425215 966 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 RPL39P6-201ENST00000448289 150 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 RPL7AP52-201ENST00000458096 790 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC021001.1-201ENST00000518703 987 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 IGHVIII-25-1-201ENST00000522143 241 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 OR5AN2P-201ENST00000534535 896 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AK6P1-201ENST00000540219 478 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 NDUFA3P4-201ENST00000560814 250 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 TSHZ2-205ENST00000626626 670 ntBASIC10.16□□□□□ -0.78
PHF8Q9UPP1 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
PHF8Q9UPP1 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC138393.1-206ENST00000540997 1886 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 RNU6-621P-201ENST00000364752 109 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
PHF8Q9UPP1 Y_RNA.394-201ENST00000383942 103 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 MIR191-201ENST00000384873 92 ntBASIC10.15□□□□□ -0.78
PHF8Q9UPP1 RNU6-248P-201ENST00000410720 107 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms