Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CISHQ9NSE2 OR13C1P-202ENST00000641378 2919 ntBASIC6.07□□□□□ -1.44
CISHQ9NSE2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CISHQ9NSE2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC096921.1-201ENST00000411661 375 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC021876.1-201ENST00000425959 359 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 MTND6P12-201ENST00000428247 522 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 BX119321.1-201ENST00000428912 797 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 RPL12P24-201ENST00000474907 486 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC117394.1-201ENST00000477323 567 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 RNU6-615P-201ENST00000516065 106 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 IGLV3-24-201ENST00000517477 197 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC137627.1-201ENST00000545761 289 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AP001357.1-201ENST00000586304 1053 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 AL390318.1-201ENST00000624564 687 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 RPS2P45-201ENST00000469997 2057 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 SRRM1P3-201ENST00000426911 2678 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.06□□□□□ -1.44
CISHQ9NSE2 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 PWAR1-201ENST00000624188 2414 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
CISHQ9NSE2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.06□□□□□ -1.44
CISHQ9NSE2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 MAPK10-270ENST00000641102 3538 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC138907.8-201ENST00000623981 2256 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 RMRPP5-201ENST00000411156 267 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 AL662874.1-201ENST00000426065 230 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 SUMO2P3-201ENST00000438311 288 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 LRRC37A14P-201ENST00000452297 462 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC087672.1-201ENST00000479876 766 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 DUTP7-201ENST00000507982 486 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC090568.1-201ENST00000509499 856 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 SNORA43.3-201ENST00000517240 103 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 CYCSP22-201ENST00000517555 339 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 AP001962.1-201ENST00000624114 559 ntBASIC6.05□□□□□ -1.44
CISHQ9NSE2 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CISHQ9NSE2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CISHQ9NSE2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CISHQ9NSE2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CISHQ9NSE2 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms