Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AL158073.1-201ENST00000426848 1104 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AC073264.2-201ENST00000448886 166 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 snoU13.24-201ENST00000458998 104 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 RN7SL51P-201ENST00000468230 285 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AC008033.2-201ENST00000542626 177 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 OR7E25P-202ENST00000641088 5937 ntBASIC5.38□□□□□ -1.55
CHD8Q9HCK8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHD8Q9HCK8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC006141.1-201ENST00000581917 2170 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 CYCSP29-201ENST00000533731 318 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC093227.2-201ENST00000589357 285 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AL390318.1-201ENST00000624564 687 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC114947.2-201ENST00000565748 2125 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 IMMTP1-201ENST00000435590 2219 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC010478.1-201ENST00000601500 6762 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 RNA5SP211-201ENST00000365516 117 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 RN7SKP263-201ENST00000411194 309 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 NENFP1-201ENST00000419476 466 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC245047.5-201ENST00000437312 556 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 PCNPP1-201ENST00000552501 511 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC021483.2-201ENST00000567415 758 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC011447.4-201ENST00000587562 111 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 AC034229.6-201ENST00000623704 224 ntBASIC5.37□□□□□ -1.55
CHD8Q9HCK8 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHD8Q9HCK8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC017104.4-201ENST00000636283 1592 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 RNA5SP487-201ENST00000410186 122 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC091167.1-201ENST00000492017 396 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 OR7H2P-201ENST00000513483 306 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AL109766.1-201ENST00000555080 552 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 MRPS21P7-201ENST00000566937 238 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AC005332.9-201ENST00000620266 2921 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 AL627171.1-201ENST00000618845 1308 ntBASIC5.36□□□□□ -1.55
CHD8Q9HCK8 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHD8Q9HCK8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms