Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 FO393419.1-201ENST00000443746 355 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC118758.1-202ENST00000454719 225 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC233279.1-201ENST00000455300 423 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 CTSLP6-201ENST00000458273 1002 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC130509.1-201ENST00000464158 433 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 RPL29P23-201ENST00000486188 442 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 RN7SL153P-201ENST00000486501 292 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AF213884.1-201ENST00000488102 463 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 CHCHD3P2-201ENST00000550751 639 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 HMGB1P33-201ENST00000563485 527 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC142086.3-201ENST00000563896 802 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 LCMT1-AS1-202ENST00000563962 766 ntTSL 3 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC011474.3-201ENST00000587520 250 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 BNIP3P15-201ENST00000604600 301 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC106782.6-201ENST00000611264 512 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AL592295.2-201ENST00000612578 206 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AP001506.1-201ENST00000615444 211 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AC079228.1-201ENST00000624774 1049 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 TTC6-203ENST00000476979 2253 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 AL136140.2-201ENST00000624717 1705 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 ABCF2P1-201ENST00000465687 1867 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CNTNAP3Q9BZ76 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 ZNF778-201ENST00000306502 2386 ntTSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL451064.2-201ENST00000623514 1654 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 CCNYL3-201ENST00000407030 998 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 OR2L6P-201ENST00000416377 940 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC009237.2-201ENST00000421358 284 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 MTCO1P20-201ENST00000425366 358 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC104843.2-201ENST00000427666 297 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL022237.1-201ENST00000446663 358 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 VDAC2P4-201ENST00000452925 711 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 DDX39BP2-208ENST00000453923 258 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 PNPLA4P1-201ENST00000458328 305 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AL590326.1-201ENST00000460857 334 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 OPRK1-204ENST00000524278 1195 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 RNF185-AS1-201ENST00000526089 353 ntBASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CNTNAP3Q9BZ76 AP002453.2-201ENST00000533503 320 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms