Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 MIR130B-202ENST00000385018 82 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 ATP5LP2-201ENST00000440646 311 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 YRDCP3-201ENST00000456507 480 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC099521.1-201ENST00000482557 334 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 RPL38P3-201ENST00000484463 213 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 RBBP4P1-201ENST00000502424 1276 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC027026.1-201ENST00000532323 742 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC007956.1-201ENST00000555623 542 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC008507.3-201ENST00000585753 472 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC091167.5-201ENST00000605689 894 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 MIR6889-201ENST00000613185 59 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AL021918.2-201ENST00000613415 194 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 SSXP3-201ENST00000442971 1300 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AC012078.1-201ENST00000405035 1646 ntBASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.64□□□□□ -1.67
TTC9CQ8N5M4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL158152.1-201ENST00000602652 1435 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 RPL11P3-201ENST00000395256 523 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL590399.2-201ENST00000427536 309 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 CRIP1P1-201ENST00000427567 185 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 RPS12P17-201ENST00000438591 377 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 RPSAP40-201ENST00000442343 891 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC023141.8-201ENST00000442554 208 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC068491.1-201ENST00000449539 1241 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC068228.1-201ENST00000461723 211 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 LSM3P4-201ENST00000502948 309 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 SETP21-201ENST00000514799 892 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 SCARNA18.1-201ENST00000516330 83 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 WBP1LP3-201ENST00000523033 208 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC090826.1-203ENST00000569235 490 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 GARSP1-201ENST00000570895 719 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL133481.2-203ENST00000607558 139 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 MIR6809-201ENST00000612189 116 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 AC069542.2-201ENST00000624816 216 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 KYNUP3-201ENST00000574386 1341 ntBASIC4.63□□□□□ -1.67
TTC9CQ8N5M4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms