Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RPS18P1-201ENST00000447840 458 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC015908.1-201ENST00000478739 476 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC124945.1-201ENST00000485133 188 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 RNA5SP434-201ENST00000516647 121 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 RN7SKP5-201ENST00000517045 272 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC242628.1-201ENST00000606810 391 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC117490.2-201ENST00000610042 594 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC016583.1-201ENST00000624221 2431 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC119674.1-202ENST00000641333 1860 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 MAPK10-328ENST00000641553 4009 ntBASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLIP4Q8N3C7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL136520.1-201ENST00000600311 1322 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 PSMA6P1-201ENST00000400275 741 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL589655.1-201ENST00000405398 482 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 UBE2V1P15-201ENST00000407776 448 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 UBE2V1P6-201ENST00000430840 422 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 NDUFA5P1-201ENST00000433858 341 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 SUMO2P8-201ENST00000434672 286 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL691517.1-201ENST00000440833 1235 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL590004.3-202ENST00000445883 451 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL162739.1-201ENST00000450606 307 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC004890.1-201ENST00000461005 181 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 H3F3AP5-201ENST00000475267 429 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 SNRPCP11-201ENST00000492453 205 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MTND3P24-201ENST00000506306 329 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC090958.1-201ENST00000511122 351 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 ZNF519P4-201ENST00000514008 125 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 RNU6-415P-201ENST00000516252 97 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AP001823.1-201ENST00000604056 1003 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 NDUFB9P1-201ENST00000604683 510 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC135803.1-201ENST00000608748 565 ntBASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.6□□□□□ -1.51
CLIP4Q8N3C7 AC012676.3-201ENST00000614983 479 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms