Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AP005597.4-201ENST00000526762 229 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 NDUFA3P2-201ENST00000531434 232 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 NPIPB14P-203ENST00000532298 987 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AP002453.2-201ENST00000533503 320 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC126323.4-201ENST00000566935 234 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 MIR3171-201ENST00000584270 74 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 VN1R79P-201ENST00000593540 513 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC005518.2-201ENST00000603254 282 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 SEPT7P9-203ENST00000604116 343 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 U47924.1-201ENST00000606539 434 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 RMST_10.1-201ENST00000616309 154 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 uc_338.37-201ENST00000620113 186 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 YWHAEP7-203ENST00000622054 312 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC073488.8-201ENST00000631952 757 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 MIR6863-201ENST00000636112 90 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 FKTN-202ENST00000357998 2404 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 TTC3P1-201ENST00000399586 6081 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC110998.1-201ENST00000519029 2053 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 AC126474.2-201ENST00000623268 1750 ntBASIC7.82□□□□□ -1.16
NPAS3Q8IXF0 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC020904.2-202ENST00000614660 1401 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 ICE2P1-201ENST00000512800 1849 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 Y_RNA.431-201ENST00000384086 102 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 SNORA40.2-201ENST00000390847 128 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC008072.1-201ENST00000434254 824 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 RPS10P14-201ENST00000440748 502 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC022364.2-201ENST00000457963 554 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC236972.4-201ENST00000458091 963 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 KLRA1P-201ENST00000503499 986 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC006499.5-201ENST00000505037 514 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC098799.3-201ENST00000506095 438 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC113347.3-201ENST00000509113 148 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC133963.2-201ENST00000513686 578 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC096661.1-201ENST00000515870 822 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 MTCO2P4-201ENST00000517968 247 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AK6P1-201ENST00000540219 478 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AL163952.1-202ENST00000569625 600 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CYP4A44P-201ENST00000569984 154 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC010487.1-201ENST00000594408 1172 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AC113361.1-201ENST00000606683 543 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 SERPINB11-209ENST00000624518 573 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 HSPD1P7-201ENST00000447985 1686 ntBASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPAS3Q8IXF0 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms