Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC009220.2-201ENST00000489759 1751 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 OR5P1P-201ENST00000299512 925 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RNU1-21P-201ENST00000363327 163 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 Y_RNA.166-201ENST00000363730 102 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 FHL1-203ENST00000370676 833 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PHBP1-201ENST00000392260 808 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LINC01347-201ENST00000417964 355 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 SNRPEP10-201ENST00000420249 274 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RPS27AP14-201ENST00000422868 454 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL356583.2-201ENST00000426536 280 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 FO393419.3-201ENST00000428741 282 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RABEPKP1-201ENST00000440529 1026 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC010878.1-201ENST00000456500 1047 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RPS20P20-201ENST00000460498 340 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RPL38P1-201ENST00000460914 211 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PSAT1P4-201ENST00000466500 526 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RN7SL91P-201ENST00000469313 291 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PA2G4P4-201ENST00000473864 1182 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AF305872.1-201ENST00000485217 471 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LEMD1-208ENST00000495594 637 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 NTAN1P2-201ENST00000515730 940 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC090774.2-201ENST00000584708 322 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LINC01515-209ENST00000599409 755 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 VN1R107P-201ENST00000601784 209 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RPL23AP90-201ENST00000603820 236 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC140658.6-201ENST00000603958 201 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL136363.1-201ENST00000605349 337 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 ACACA-232ENST00000614438 569 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC110998.1-201ENST00000519029 2053 ntBASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SCUBE3Q8IX30 AL080317.3-201ENST00000607434 4315 ntBASIC8.27□□□□□ -1.08
SCUBE3Q8IX30 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.27□□□□□ -1.08
SCUBE3Q8IX30 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.27□□□□□ -1.08
SCUBE3Q8IX30 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.27□□□□□ -1.08
SCUBE3Q8IX30 AL136298.2-201ENST00000556497 1570 ntBASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AL354719.2-201ENST00000429530 1454 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SCUBE3Q8IX30 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms