Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7□□□□□ -1.29
CTR9Q6PD62 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7□□□□□ -1.29
CTR9Q6PD62 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CTR9Q6PD62 AC015689.2-201ENST00000528172 1738 ntBASIC7□□□□□ -1.29
CTR9Q6PD62 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7□□□□□ -1.29
CTR9Q6PD62 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTR9Q6PD62 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7□□□□□ -1.29
CTR9Q6PD62 AP000473.2-201ENST00000602659 1537 ntBASIC7□□□□□ -1.29
CTR9Q6PD62 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTR9Q6PD62 AC106872.5-201ENST00000508856 1416 ntBASIC7□□□□□ -1.29
CTR9Q6PD62 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7□□□□□ -1.29
CTR9Q6PD62 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTR9Q6PD62 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTR9Q6PD62 AC130304.1-201ENST00000622942 2385 ntBASIC7□□□□□ -1.29
CTR9Q6PD62 AC016745.2-201ENST00000608834 3443 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 SAMM50P1-201ENST00000455403 1399 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 RN7SKP78-201ENST00000364711 318 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 EEF1B2P8-201ENST00000414101 671 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC017078.1-201ENST00000416146 368 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 RPL31P15-201ENST00000449770 338 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 AL445665.1-202ENST00000452436 324 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 RPL38P3-201ENST00000484463 213 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 RPL7P51-201ENST00000490532 749 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 GAPDHP71-201ENST00000511530 1003 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 RN7SKP288-201ENST00000516227 268 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 IGLVIV-64-201ENST00000518581 301 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 HMGN2P36-201ENST00000529541 409 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 OR4A42P-201ENST00000531397 938 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC016839.1-201ENST00000578162 867 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 FAM27E4-201ENST00000605259 342 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
CTR9Q6PD62 KARSP1-201ENST00000451871 1752 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 OR13C1P-202ENST00000641378 2919 ntBASIC6.99□□□□□ -1.29
CTR9Q6PD62 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTR9Q6PD62 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC005261.6-201ENST00000623072 1387 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 VTI1BP4-201ENST00000427516 527 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 SUMO2P3-201ENST00000438311 288 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AL603882.1-201ENST00000463059 681 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 PFN1P6-201ENST00000476786 399 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 NPM1P28-201ENST00000492269 840 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC079600.1-201ENST00000550326 297 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AL139099.4-201ENST00000614802 114 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AL355974.3-201ENST00000617383 467 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC127024.6-201ENST00000621598 424 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC022919.1-201ENST00000624979 626 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC008691.1-209ENST00000642094 814 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.98□□□□□ -1.29
CTR9Q6PD62 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CTR9Q6PD62 AC079753.1-201ENST00000623243 3868 ntBASIC6.98□□□□□ -1.29
CTR9Q6PD62 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.97□□□□□ -1.29
CTR9Q6PD62 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CTR9Q6PD62 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CTR9Q6PD62 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
CTR9Q6PD62 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.97□□□□□ -1.29
CTR9Q6PD62 AP001284.1-201ENST00000528393 2118 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms