Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL20P78556 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 NXT1P1-201ENST00000458481 316 ntBASIC4.4□□□□□ -1.71
CCL20P78556 RN7SL188P-201ENST00000469842 285 ntBASIC4.4□□□□□ -1.71
CCL20P78556 RN7SL223P-201ENST00000470401 294 ntBASIC4.4□□□□□ -1.71
CCL20P78556 AC114940.1-201ENST00000512162 1265 ntBASIC4.4□□□□□ -1.71
CCL20P78556 RN7SKP242-201ENST00000515967 289 ntBASIC4.4□□□□□ -1.71
CCL20P78556 CYCSP25-201ENST00000525280 316 ntBASIC4.4□□□□□ -1.71
CCL20P78556 TRIM51DP-201ENST00000529746 596 ntBASIC4.4□□□□□ -1.71
CCL20P78556 AP006437.1-202ENST00000530327 933 ntBASIC4.4□□□□□ -1.71
CCL20P78556 AC103855.4-201ENST00000533158 265 ntBASIC4.4□□□□□ -1.71
CCL20P78556 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL20P78556 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL20P78556 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
CCL20P78556 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL20P78556 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.4□□□□□ -1.71
CCL20P78556 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL20P78556 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.4□□□□□ -1.71
CCL20P78556 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.4□□□□□ -1.71
CCL20P78556 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL20P78556 AL022393.1-201ENST00000625142 1677 ntBASIC4.4□□□□□ -1.71
CCL20P78556 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL20P78556 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCL20P78556 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCL20P78556 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CCL20P78556 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 AL442128.2-201ENST00000620246 1824 ntBASIC4.39□□□□□ -1.71
CCL20P78556 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CCL20P78556 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCL20P78556 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCL20P78556 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CCL20P78556 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 THEM7P-201ENST00000419556 672 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 NANOGP4-201ENST00000427230 913 ntBASIC4.39□□□□□ -1.71
CCL20P78556 RPL34P6-201ENST00000432390 345 ntBASIC4.39□□□□□ -1.71
CCL20P78556 PSMD10P2-201ENST00000432890 672 ntBASIC4.39□□□□□ -1.71
CCL20P78556 NANOGP9-201ENST00000439890 892 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 GAPDHP37-201ENST00000442317 968 ntBASIC4.39□□□□□ -1.71
CCL20P78556 FTLP8-201ENST00000446770 267 ntBASIC4.39□□□□□ -1.71
CCL20P78556 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.39□□□□□ -1.71
CCL20P78556 RN7SL72P-201ENST00000460697 269 ntBASIC4.39□□□□□ -1.71
CCL20P78556 RPS7P10-201ENST00000464254 603 ntBASIC4.39□□□□□ -1.71
CCL20P78556 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.39□□□□□ -1.71
CCL20P78556 RPL5P15-201ENST00000475870 897 ntBASIC4.39□□□□□ -1.71
CCL20P78556 ATP5LP5-201ENST00000483050 299 ntBASIC4.39□□□□□ -1.71
CCL20P78556 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 NIFKP7-201ENST00000503365 834 ntBASIC4.39□□□□□ -1.71
CCL20P78556 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.39□□□□□ -1.71
CCL20P78556 AC095052.1-201ENST00000509955 863 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 AC096661.1-201ENST00000515870 822 ntBASIC4.39□□□□□ -1.71
CCL20P78556 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 RBMS2P1-201ENST00000525031 1226 ntBASIC4.39□□□□□ -1.71
CCL20P78556 OR5AM1P-201ENST00000532136 1032 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.39□□□□□ -1.71
CCL20P78556 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.39□□□□□ -1.71
CCL20P78556 OR4C49P-201ENST00000563891 900 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 MIR378H-201ENST00000579966 83 ntBASIC4.39□□□□□ -1.71
CCL20P78556 SMIM12P1-201ENST00000603004 274 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AL021918.2-201ENST00000613415 194 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AC009283.1-201ENST00000615852 645 ntBASIC4.39□□□□□ -1.71
CCL20P78556 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
CCL20P78556 RFPL4AP6-201ENST00000616792 846 ntBASIC4.39□□□□□ -1.71
CCL20P78556 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCL20P78556 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.39□□□□□ -1.71
CCL20P78556 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.39□□□□□ -1.71
CCL20P78556 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
CCL20P78556 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
CCL20P78556 SMG1P4-204ENST00000523028 4131 ntBASIC4.39□□□□□ -1.71
CCL20P78556 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCL20P78556 QRSL1P3-201ENST00000552666 1316 ntBASIC4.39□□□□□ -1.71
CCL20P78556 XKRY2-202ENST00000623874 1581 ntBASIC4.39□□□□□ -1.71
CCL20P78556 XKRY-202ENST00000624960 1581 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms